LOCUS AEC06266.1 661 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Cysteine/Histidine-rich C1 domain
family protein protein.
ACCESSION CP002685-1208
PROTEIN_ID AEC06266.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G13900"
/gene_synonym="F17L24.4"
/gene_synonym="F17L24_4"
/inference="Similar to RNA sequence,
EST:INSD:EG425767.1,INSD:EG432792.1,INSD:EG424049.1,
INSD:EG447698.1,INSD:EG425760.1,INSD:EG425759.1,
INSD:EG425764.1,INSD:EG425761.1,INSD:EG438371.1,
INSD:EG447699.1,INSD:EG432791.1,INSD:EG425745.1,
INSD:EG425756.1,INSD:EG438330.1,INSD:EG425768.1,
INSD:EG424050.1,INSD:EG425747.1,INSD:EG425766.1,
INSD:EG447696.1,INSD:EG438370.1,INSD:EG438369.1,
INSD:EG432790.1,INSD:EG425769.1,INSD:EG438368.1,
INSD:EG425757.1"
/inference="similar to RNA sequence, mRNA:INSD:AY247816.1"
/note="Cysteine/Histidine-rich C1 domain family protein;
FUNCTIONS IN: zinc ion binding; CONTAINS InterPro
DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), DC1
(InterPro:IPR004146), Zinc finger, PHD-type
(InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST
Arabidopsis thaliana protein match is:
Cysteine/Histidine-rich C1 domain family protein
(TAIR:AT5G02350.1); Has 1291 Blast hits to 617 proteins in
19 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi -
0; Plants - 1281; Viruses - 0; Other Eukaryotes - 4
(source: NCBI BLink)."
/db_xref="Araport:AT2G13900"
/db_xref="TAIR:AT2G13900"
BEGIN
1 MNSNPVGVFR EREIDGKPFH IYTLSSQTDT TIPSSSGETA IDGDDHLSLQ QPLFLCPSLR
61 LRVHEENNSY TEFLPYKTSP HFPSIGSVDQ QVQHLLDSDS QQVHDLLHSD SSHDDDDDDD
121 VICKLPVVPI YWCNSKELDY DQFNCGACER SKIGTNYYVC LTCDLMFHKE CVESPLEIKH
181 PSYPFLSLKL YNRPGHRVSC MCCDLALCSM LYHCPTYKLS MHPVCAMKPI PIFIDHSKRH
241 PHLLTFFPKQ ASLLCDVCGL VKESFPTYVC VRCIFVVHRD CIYFPFVIKI CRHHHRISFT
301 SSLPSGKWSC GVCRQKVDNN CGAYTCNKCN HYFVHTRCAL REDVWDGKDL EGVPEEPEII
361 LEPFETIADG IILHFSHGHH LTLEISRVYD ENKFCQACIL PIYEGNYYSC MDDCDFILHE
421 ACANASRKKH HALHGHPLTL KIVPGEQEYY KDYFQCSACY RQSCGYVYEA GYYRIDLRCA
481 SVSEPFQYQG HEHPLFLALD RQQELEATCQ ICQQKATFLR KLNCIECDYV ICFKCATLPY
541 EAKYKHDKHF LTFREGKEES DQLDWCEVCE KRIVYSRKDG FYACDHCCTT LHVHCLLGED
601 MYMLKPSQTI TYIKREVHIL PNNTRSRPFC HHHDEDRCPH KVVFKWQDQY TIFCSYRCLT
661 K
//