LOCUS AEC06258.1 343 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana nuclease protein.
ACCESSION CP002685-1195
PROTEIN_ID AEC06258.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G13770"
/gene_synonym="F13J11.12"
/gene_synonym="F13J11_12"
/inference="Similar to RNA sequence,
EST:INSD:EG476042.1,INSD:EG472177.1,INSD:EG448930.1,
INSD:EG472186.1,INSD:EG476930.1,INSD:EG449152.1,
INSD:EG472192.1,INSD:EG448819.1,INSD:EG472168.1,
INSD:EG476486.1,INSD:EG476597.1,INSD:EG475931.1,
INSD:EG449486.1,INSD:EG476153.1,INSD:EG472180.1,
INSD:EG449041.1,INSD:EG472179.1,INSD:EG472181.1,
INSD:EG472167.1,INSD:EG476708.1,INSD:EG449597.1,
INSD:EG476264.1,INSD:EG472172.1,INSD:EG476375.1,
INSD:EG472175.1,INSD:EG472178.1,INSD:EG448264.1,
INSD:EG472188.1,INSD:EG472182.1,INSD:EG449708.1,
INSD:EG477153.1,INSD:EG472173.1,INSD:EG475486.1,
INSD:EG472174.1,INSD:EG472191.1,INSD:EG477597.1,
INSD:EG477486.1,INSD:EG449819.1"
/inference="similar to RNA sequence,
mRNA:INSD:DQ446492.1,INSD:DQ652981.1"
/note="CONTAINS InterPro DOMAIN/s: Putative harbinger
transposase-derived nuclease (InterPro:IPR006912); Has 451
Blast hits to 352 proteins in 33 species: Archae - 0;
Bacteria - 0; Metazoa - 28; Fungi - 8; Plants - 388;
Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink)."
/db_xref="Araport:AT2G13770"
/db_xref="TAIR:AT2G13770"
intron_pos 205:1 (1/1)
BEGIN
1 MSFNYGSLSY IPSSFSSSSS SDNNYYDDIE KQVVSQITTN NNFLCSQHLY NSEGSHGGSI
61 HGHVVINRDR ENVARNLFID YFAEKPVFPE TMFRRRFRMS RSLFLRIYDA IKRHDNYFVQ
121 RRDGVGKLGL SGLQKMTAAF RMLAYGVPAD STDEYIKIGE STALESLKRF CRAIVEVFAC
181 CYLRSPDAND VARLLHIGES RGFPAEGTAP PASYVINGKP YNMGYYLADG IYPKWSTLVQ
241 TIHDPRGPKK KLFAMKQEAC RKDVERAFGV LQLRFAIVAG PSRLWNKTVL HDIMTSCIIM
301 HNMIIEDERD IDAPIEERVE VPIEEVEMTG DDDTRFQEFL ARH
//