LOCUS AEC06255.1 544 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana PRLI-interacting factor protein.
ACCESSION CP002685-1192
PROTEIN_ID AEC06255.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G13690"
/gene_synonym="T10F5.21"
/inference="Similar to RNA sequence,
EST:INSD:EG441756.1,INSD:EL016731.1,INSD:ES167198.1,
INSD:DR238900.1,INSD:EG441749.1,INSD:EG441748.1,
INSD:EG441750.1,INSD:ES101969.1,INSD:AU238445.1,
INSD:ES033575.1,INSD:DR238897.1,INSD:EG441747.1,
INSD:DR238896.1,INSD:ES092154.1,INSD:DR372731.1,
INSD:ES091686.1,INSD:ES033352.1,INSD:AU229632.1,
INSD:EL050471.1,INSD:EG441757.1,INSD:DR238898.1,
INSD:DR238899.1,INSD:DR238901.1,INSD:EG441753.1,
INSD:EG441755.1"
/inference="similar to RNA sequence,
mRNA:INSD:DQ069811.1,INSD:AF315734.1,INSD:BT029302.1,
INSD:AY085733.1,INSD:AK117606.2"
/note="PRLI-interacting factor, putative; BEST Arabidopsis
thaliana protein match is: BTB/POZ domain-containing
protein (TAIR:AT5G60050.1); Has 259 Blast hits to 259
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 259; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G13690"
/db_xref="TAIR:AT2G13690"
intron_pos 241:0 (1/1)
BEGIN
1 MTMGDSDLRK PTNFGTGHLS RRRSWCCSFA VPPASPDTRS ISSRNHIPAK SQQQRPKLVP
61 CSPQSSKSAL NIVNRIDPRR ILSPGRVSPI DSDPTVTTMQ ETETTQEEED DAVVVDSTPN
121 LRSESFRAPK IEVTGSGLSE GYDARLSLKG RNGGGVLVLE LSLEVLAANS DVFSGLIAEE
181 KKCSSSSSSL GLKNTCRIEV CDVENLGVFR ETVELMFEES NVIIKKFMTM GVYRAIDVLE
241 VAAGIKFSRA VLSCLKYLEA VPWTEDEEEK LRRLLGIYSF DDDAVSEILA RFNSNETENL
301 QDSLSKKLVW SITSCSDVNP RNELKSLVKG LLCKSSVYEK EQPEINKEDI YRAGKCCVDS
361 LAKLFEEGSS SSSSKKEKPL IESISREVEN INWLLEIMID REIAEEFVEI WGKQRRLVEM
421 HERVSPMVRY EVSRVTGAIF IAMGKRRVQC GGEARAGLVE AWFKPMLVDF GWLQRCKKGL
481 DMREVEEGMG QTLLTLPVKE QYQVFMEWFR WFSKHGTECP NLSKAFQIWW RRSFLRGVES
541 STCR
//