LOCUS AEC06236.1 338 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ta11-like non-LTR retrotransposon protein.
ACCESSION CP002685-1168
PROTEIN_ID AEC06236.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G13500"
/gene_synonym="T10F5.4"
/gene_synonym="T10F5_4"
/inference="Similar to RNA sequence, EST:INSD:EG430963.1"
/note="unknown protein; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G41590.1); Has 126
Blast hits to 126 proteins in 7 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 126;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G13500"
/db_xref="TAIR:AT2G13500"
intron_pos 263:2 (1/1)
BEGIN
1 MVDVLWDEIQ NLELGQDYPT LFIPNEAYVM VEDRNRLSLI ARPLLPRVQN FNAVINALPR
61 AWGLTAHVHG RILDATYVQL LFQTEIYLLS VQRREVWLFN NWFVASQRWE AAPSLNFVTT
121 IDLWVQMRGI PILYVFEKTE LEIAQELGEI ISLDFHDATS TQIAYIRVRV RFGITDRLRF
181 FQRITFESGE TALIRFQYER LRRIYSCFRF THNLNYYPYR QRFQSIDRER AVFRDSVLRS
241 SFNSQSQMTD SSLQVPLHPP PRVPSSGDAI TSGIMRVFEV GESSRGVQDG ESHNNMNLGE
301 SSKRKNLVIL QRDKESRQHK QQETEQRMGG ILKPPKKR
//