LOCUS AEC06234.1 394 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ta11-like non-LTR retrotransposon protein.
ACCESSION CP002685-1166
PROTEIN_ID AEC06234.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G13450"
/gene_synonym="T26C18.4"
/gene_synonym="T26C18_4"
/inference="Similar to RNA sequence,
EST:INSD:EG430249.1,INSD:EG430256.1,INSD:EG430257.1,
INSD:EG430868.1,INSD:EG430264.1,INSD:EG430265.1,
INSD:EG430869.1,INSD:EG430261.1,INSD:EG430250.1,
INSD:EG430266.1"
/inference="similar to RNA sequence, mRNA:INSD:AY464631.1"
/note="unknown protein; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G02000.1); Has 247
Blast hits to 243 proteins in 13 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 243;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G13450"
/db_xref="TAIR:AT2G13450"
BEGIN
1 MADELWDELQ HLELGREDPA LFIPHEAYAI VESRNRLSLI ARPLNPRSQN LHAVISALPR
61 AWGLTNRVHG RVLNDTFVQF IFQSEIDLLS VLRREPWLYN NWFVTAQRWE VNLTFHLLTS
121 IELWVQMRGI PLLYVCEETA LEIAHELGEI ITLDFHDSTT TQIAYIRVRI RFGITDRLRF
181 FLRIIFDSGE TALISFQYER LRRICSSCFR MTHHRNSCLY RQIESLHRVT NTTAQRNVRE
241 EVFMRDENLR SSMNSQSQMS ESSFPTPIDP PPRIPHPPLN PDELVAAYYP HTRATSLPNF
301 AGPLPQVPLR RNVDERDSNI QPFSGPAFAA HSPRLVEVGE SSRQGENTQN VHTVEKGDSS
361 KRKNMGGPKF KDDARKSNED EHMNGGILKP PKKR
//