LOCUS AEC06204.1 562 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ubiquitin-associated (UBA)/TS-N domain-
containing protein protein.
ACCESSION CP002685-1133
PROTEIN_ID AEC06204.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="NUB1"
/locus_tag="AT2G12550"
/gene_synonym="homolog of human NUB1"
/gene_synonym="T27D6.12"
/gene_synonym="T27D6_12"
/inference="Similar to RNA sequence,
EST:INSD:ES053781.1,INSD:BP778138.1,INSD:BP796617.1,
INSD:ES116791.1,INSD:ES030888.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819878.1,INSD:BT022114.1,INSD:BT030354.1"
/note="ubiquitin-associated (UBA)/TS-N domain-containing
protein; CONTAINS InterPro DOMAIN/s:
Ubiquitin-associated/translation elongation factor EF1B,
N-terminal, eukaryote (InterPro:IPR015940),
Ubiquitin-associated/translation elongation factor EF1B,
N-terminal (InterPro:IPR000449), Ubiquitin
(InterPro:IPR000626), Ubiquitin supergroup
(InterPro:IPR019955), UBA-like (InterPro:IPR009060); Has
35333 Blast hits to 34131 proteins in 2444 species: Archae
- 798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink)."
/db_xref="Araport:AT2G12550"
/db_xref="TAIR:AT2G12550"
intron_pos 99:2 (1/9)
intron_pos 140:2 (2/9)
intron_pos 173:0 (3/9)
intron_pos 185:0 (4/9)
intron_pos 247:2 (5/9)
intron_pos 282:0 (6/9)
intron_pos 342:2 (7/9)
intron_pos 368:2 (8/9)
intron_pos 434:1 (9/9)
BEGIN
1 MAKLKVAGTW GGILEVELEN WTLNMLRDEV AKRSGLDPES IKLIFAGKIL KDDGDATLTL
61 SQLGIKENSK ILSCRQAAPE EGKSIMAEEE RARRLSRVKA AATALSKRHA DGSLPIQDYN
121 IELEDQGGHK VQFGTETDQS AAMMGLMLHT KAKSLIEIEM YSDAVEVLAM AEESFLLCDP
181 KILELVDNLP MMEIDIVWCY FLLRDIKCLS DAGVRLVRAR KGLERAHGKD LSRVRLLQAG
241 QSPEMAIYLR LELLEGVVAY HTGQNDKALN ALKSAHAKFL QLQIPDETLS LVMGMGFQEK
301 DAKRALRLNN QDIASSVDFL IEERAKKAQK REQDLQRQSE ILEQKKYGVT PMKKAVDMQM
361 LERLVSIGYA RELAAESLRR NENDIQKALD ILTDPKVNST IQAYIESRKR KRQEQLVGIS
421 VAELVSMGFE RGKATSALEA GGSREDTIQR LLSASVANPG TTTTSVINAT SSTNNVGAES
481 SGFGGGAEQD SEMKDETTDD IANRASTSSD GMEEERDSEI EDEIADEIAR VDALSAYDIN
541 LDKEIEAINE YLAMLDASQE SC
//