LOCUS AEC06138.1 146 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein S5 domain 2-like
superfamily protein protein.
ACCESSION CP002685-1045
PROTEIN_ID AEC06138.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G09990"
/gene_synonym="F7B19.13"
/gene_synonym="F7B19_13"
/inference="Similar to RNA sequence,
EST:INSD:ES131310.1,INSD:DR287771.1,INSD:DR287760.1,
INSD:EH941209.1,INSD:EH856963.1,INSD:EL192894.1,
INSD:ES132864.1,INSD:DR287759.1,INSD:ES074697.1,
INSD:ES205297.1,INSD:DR287756.1,INSD:EH870180.1,
INSD:EL146041.1,INSD:EL090075.1,INSD:ES090405.1,
INSD:EH944476.1,INSD:ES053609.1,INSD:EH942142.1,
INSD:ES114308.1,INSD:ES182502.1,INSD:DR287764.1,
INSD:EL977170.1,INSD:ES133465.1,INSD:EL270189.1,
INSD:T43252.1,INSD:ES030499.1,INSD:EH912182.1,
INSD:DR287765.1,INSD:ES125597.1,INSD:T44973.1,
INSD:EL204203.1,INSD:ES170774.1,INSD:ES087269.1,
INSD:ES074357.1,INSD:ES064168.1,INSD:ES128440.1,
INSD:ES196046.1,INSD:EH847879.1,INSD:EL970989.1,
INSD:ES188486.1,INSD:EL101415.1,INSD:ES171045.1,
INSD:ES165725.1,INSD:DR287772.1,INSD:ES082397.1,
INSD:ES185886.1,INSD:ES129612.1,INSD:DR287755.1,
INSD:EL016967.1,INSD:ES165085.1,INSD:ES159019.1,
INSD:DR287751.1,INSD:EL304635.1,INSD:EL260908.1,
INSD:EH968449.1,INSD:CK119408.1,INSD:EL987316.1,
INSD:EL286826.1,INSD:ES099788.1,INSD:ES085965.1,
INSD:ES003775.1,INSD:ES173030.1,INSD:DR287766.1,
INSD:EL137111.1,INSD:ES014767.1,INSD:DR287757.1,
INSD:EH894446.1,INSD:EL319489.1,INSD:DR287754.1,
INSD:BP802842.1,INSD:ES091771.1,INSD:EL204813.1,
INSD:ES152023.1,INSD:ES014356.1,INSD:ES084839.1,
INSD:EL131916.1,INSD:EL210523.1,INSD:EL172449.1,
INSD:ES178088.1,INSD:EL063902.1,INSD:EH946145.1,
INSD:ES056152.1,INSD:EH960966.1,INSD:ES137011.1,
INSD:EL043732.1,INSD:ES177913.1,INSD:ES166239.1,
INSD:DR287752.1,INSD:ES197348.1,INSD:CF773120.1,
INSD:ES104886.1,INSD:EH802591.1,INSD:ES215822.1,
INSD:ES066896.1,INSD:EH802107.1,INSD:DR287758.1,
INSD:ES054909.1,INSD:EH873481.1,INSD:EL184996.1,
INSD:EH926030.1,INSD:EL287623.1,INSD:BP814104.1,
INSD:ES002758.1,INSD:DR374456.1,INSD:DR287753.1,
INSD:ES128896.1,INSD:ES209903.1,INSD:ES190725.1,
INSD:EL260691.1,INSD:DR287770.1,INSD:EH950165.1,
INSD:DR287768.1,INSD:EH861068.1,INSD:BP563042.1,
INSD:ES006981.1,INSD:ES038268.1,INSD:EH973026.1,
INSD:CK119608.1,INSD:ES022877.1,INSD:EL973479.1,
INSD:EL255315.1,INSD:ES170016.1,INSD:AI999565.1,
INSD:EL169520.1,INSD:EL128493.1,INSD:EL049888.1,
INSD:AU230282.1,INSD:ES177001.1,INSD:DR287763.1,
INSD:EH855582.1,INSD:DR287767.1,INSD:CF773109.1,
INSD:DR287769.1,INSD:ES124877.1,INSD:EL275790.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF370576.1,INSD:AK118167.1,INSD:AY086902.1"
/note="Ribosomal protein S5 domain 2-like superfamily
protein; FUNCTIONS IN: structural constituent of ribosome;
INVOLVED IN: translation; LOCATED IN: cytosolic small
ribosomal subunit, cytosolic ribosome, cell wall,
chloroplast, membrane; EXPRESSED IN: guard cell, callus,
leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro
DOMAIN/s: Ribosomal protein S9 (InterPro:IPR000754),
Ribosomal protein S5 domain 2-type fold
(InterPro:IPR020568), Ribosomal protein S9, conserved site
(InterPro:IPR020574), Ribosomal protein S5 domain 2-type
fold, subgroup (InterPro:IPR014721); BEST Arabidopsis
thaliana protein match is: Ribosomal protein S5 domain
2-like superfamily protein (TAIR:AT5G18380.1); Has 7467
Blast hits to 7467 proteins in 2677 species: Archae - 233;
Bacteria - 4861; Metazoa - 362; Fungi - 182; Plants - 151;
Viruses - 0; Other Eukaryotes - 1678 (source: NCBI
BLink)."
/db_xref="Araport:AT2G09990"
/db_xref="TAIR:AT2G09990"
BEGIN
1 MATQPATESV QCFGRKKTAV AVTHCKRGSG LIKLNGCPIE LFQPEILRFK IFEPILLLGK
61 HRFAGVNMRI RVNGGGHTSQ VYAIRQSIAK ALVAYYQKYV DEQSKKEIKD ILVRYDRTLL
121 VADPRRCEPK KFGGRGARSR YQKSYR
//