LOCUS AEC06012.1 225 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SNF7 family protein protein.
ACCESSION CP002685-874
PROTEIN_ID AEC06012.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="VPS2.1"
/locus_tag="AT2G06530"
/gene_synonym="T12H3.8"
/gene_synonym="T12H3_8"
/gene_synonym="VPS2"
/inference="Similar to RNA sequence,
EST:INSD:ES152361.1,INSD:AV559901.1,INSD:BP569367.1,
INSD:ES082444.1,INSD:EL063957.1,INSD:EL145685.1,
INSD:BP603827.1,INSD:ES080380.1,INSD:EH816612.1,
INSD:EL122647.1,INSD:AV566006.1,INSD:BP635165.1,
INSD:AV828123.1,INSD:DR242224.1,INSD:ES190461.1,
INSD:BP667962.1,INSD:CF652786.1,INSD:EL094045.1,
INSD:BP860400.1,INSD:BP571582.1,INSD:BP867676.2,
INSD:CB252075.1,INSD:DR378216.1,INSD:BP801197.1,
INSD:BP564880.1,INSD:AV440681.1,INSD:EH831921.1,
INSD:EL197953.1,INSD:BP582914.1,INSD:AV442460.1,
INSD:EL257717.1,INSD:AV800439.1,INSD:H76448.1,
INSD:EL245536.1,INSD:AV787627.1,INSD:EL132352.1,
INSD:ES213565.1,INSD:EH975539.1,INSD:BP860186.1,
INSD:EL205266.1,INSD:BE038139.1,INSD:AV553729.1,
INSD:BP864552.1,INSD:EG516796.1,INSD:EL319268.1,
INSD:DR242225.1,INSD:BP635611.1,INSD:BP623621.1,
INSD:EH950751.1,INSD:AV545071.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY088685.1,INSD:AY090953.1,INSD:BX821945.1"
/note="VPS2.1; CONTAINS InterPro DOMAIN/s: Snf7
(InterPro:IPR005024); BEST Arabidopsis thaliana protein
match is: vacuolar protein sorting-associated protein 2.3
(TAIR:AT1G03950.1); Has 2524 Blast hits to 2516 proteins
in 271 species: Archae - 17; Bacteria - 20; Metazoa -
1106; Fungi - 512; Plants - 555; Viruses - 5; Other
Eukaryotes - 309 (source: NCBI BLink)."
/db_xref="Araport:AT2G06530"
/db_xref="TAIR:AT2G06530"
intron_pos 14:1 (1/4)
intron_pos 58:0 (2/4)
intron_pos 93:0 (3/4)
intron_pos 180:0 (4/4)
BEGIN
1 MMNSIFGKRK TPAELLRENK RMLDKSIREI ERERQGLQTQ EKKLINEIKK TAKQGQMGAV
61 KVMAKDLIRT RHQIEKFYKL KSQLQGVSLR IQTLKSTQAM GEAMKGVTKA MGQMNRQMNL
121 PSLQKIMQEF ERQNEKMEMV SEVMGDAIDD ALEGDEEEEE TEDLVSQVLD EIGIDINQEL
181 VNAPSGAVAV PAAKNKVVQA EATGAEDSGG IDSDLQARLD NLRKM
//