LOCUS AEC06010.1 640 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana replication protein A 1A protein.
ACCESSION CP002685-871
PROTEIN_ID AEC06010.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="RPA1A"
/locus_tag="AT2G06510"
/gene_synonym="ARABIDOPSIS THALIANA REPLICATION PROTEIN A
1A"
/gene_synonym="ARABIDOPSIS THALIANA RPA70-KDA SUBUNIT A"
/gene_synonym="ATRPA1A"
/gene_synonym="ATRPA70A"
/gene_synonym="replication protein A 1A"
/gene_synonym="RPA70-KDA SUBUNIT A"
/gene_synonym="RPA70A"
/gene_synonym="T12H3.6"
/gene_synonym="T12H3_6"
/inference="Similar to RNA sequence,
EST:INSD:EH913037.1,INSD:BX834353.1,INSD:BP806893.1,
INSD:BX837315.1,INSD:EL229741.1,INSD:AV547614.1,
INSD:EG473830.1,INSD:EH896147.1,INSD:EH873226.1,
INSD:EH943471.1,INSD:EH830082.1,INSD:BX834955.1,
INSD:EH899984.1,INSD:EH986982.1,INSD:CB259323.1,
INSD:EL272733.1,INSD:EH884459.1,INSD:AU230894.1,
INSD:AV567642.1,INSD:BX834777.1,INSD:DR353206.1,
INSD:EL144731.1,INSD:ES206833.1,INSD:BP826510.1,
INSD:EH862807.1,INSD:ES111919.1,INSD:AU239569.1,
INSD:EH961053.1,INSD:DR353207.1,INSD:AV567185.1,
INSD:DR383403.1,INSD:EL047844.1,INSD:EL215761.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT005946.1,INSD:AK118699.1,INSD:BX821009.1"
/note="replication protein A 1A (RPA1A); FUNCTIONS IN: DNA
binding, nucleic acid binding; INVOLVED IN: in 6
processes; LOCATED IN: nuclear chromatin; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Replication factor-a protein 1
Rpa1 (InterPro:IPR004591), Nucleic acid-binding,
OB-fold-like (InterPro:IPR016027), Nucleic acid-binding,
OB-fold (InterPro:IPR012340), Nucleic acid binding,
OB-fold, tRNA/helicase-type (InterPro:IPR004365),
Replication factor A, C-terminal (InterPro:IPR013955),
Replication factor-A protein 1, N-terminal
(InterPro:IPR007199); BEST Arabidopsis thaliana protein
match is: Replication factor-A protein 1-related
(TAIR:AT4G19130.1); Has 932 Blast hits to 912 proteins in
229 species: Archae - 16; Bacteria - 0; Metazoa - 191;
Fungi - 147; Plants - 421; Viruses - 0; Other Eukaryotes -
157 (source: NCBI BLink)."
/db_xref="Araport:AT2G06510"
/db_xref="TAIR:AT2G06510"
intron_pos 91:2 (1/1)
BEGIN
1 MPVSLTPNAI TAIHDGDVNL KPLLQVLEIK MIGRSQERSQ ERYRFLISDG VSAQHAMVAV
61 QLNDRVKSGQ FEKGSIVQLI DYICSDVKGR KLIVVLNMET IVQQSETIGN PTIFGETDTE
121 AQKTFSGTGN IPPPNRVVFN EPMVQHSVNR APPRGVNIQN QANNTPSFRP SVQPSYQPPA
181 SYRNHGPIMK NEAPARVIPI AALNPYQGRW AIKARVTAKG DIRRYNNAKG DGKVFSFDLL
241 DYDGGEIRVT CFNALVDRFY DVTEVGKVYL ISKGSLKPAQ KNFNHLKNEW EIFLESTSTV
301 ELCPDEDGSI PKQQFSFRPI SDIENAENNT ILDVIGVVTS VNPSVPILRK NGMETHRRIL
361 NLKDESGKAV EVTLWGEFCN RDGRQLEEMV DSAFHPVLAI KAGKVSDFSG KSVGTISSTQ
421 LFINPDFPEA HKLRTWFDYG GKDTASFSIS RDTMPGGVSR NEIRKNVSQI KEEGLGRSDK
481 PDWITVKATI SFIKTDSFCY TACPLMIGDK QCNKKVTRSG TNRWLCDRCN QESDECDYRY
541 LLQVQIQDHT GLTWITAFQE TGEEIMGCPA KKLYAMKYEL EKEEEFAEIV RDRLFHQYML
601 KLKIKEESYG DEQRVKMTVV KVDKVNYTSE SKYMLDLLVR
//