LOCUS AEC05993.1 355 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana FRIGIDA interacting protein 1 protein.
ACCESSION CP002685-839
PROTEIN_ID AEC05993.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="FIP1"
/locus_tag="AT2G06005"
/gene_synonym="FRIGIDA interacting protein 1"
/inference="Similar to RNA sequence,
EST:INSD:DR381767.1,INSD:AI998621.1,INSD:ES198727.1,
INSD:ES107093.1"
/inference="similar to RNA sequence, mRNA:INSD:BX819465.1"
/note="FRIGIDA interacting protein 1 (FIP1); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G20580.2); Has 339 Blast hits to 333 proteins in
113 species: Archae - 0; Bacteria - 43; Metazoa - 135;
Fungi - 18; Plants - 56; Viruses - 0; Other Eukaryotes -
87 (source: NCBI BLink)."
/db_xref="Araport:AT2G06005"
/db_xref="TAIR:AT2G06005"
intron_pos 19:2 (1/13)
intron_pos 49:0 (2/13)
intron_pos 85:1 (3/13)
intron_pos 102:0 (4/13)
intron_pos 124:1 (5/13)
intron_pos 148:2 (6/13)
intron_pos 167:1 (7/13)
intron_pos 199:2 (8/13)
intron_pos 227:0 (9/13)
intron_pos 248:0 (10/13)
intron_pos 268:0 (11/13)
intron_pos 299:0 (12/13)
intron_pos 320:0 (13/13)
BEGIN
1 MSTERRASSN PMTNEENAMF LDILHEAPLF GHRKSRSLVG SYLYMLLLAG YAILAAGAPW
61 MFHRVQQLTP SLLCCCDVAL LVVTGVFQQY FVYQVQKIRL QGYYSFSQKL KHVVRLPFAI
121 AAYGTAAMLL VIVWRPQIHI LSISSLQRII MLVEAVGAGF FMGLYIGYVH QYNSVNSRPD
181 VLKSLYSPLQ PSSSMEGLRY YEGRLSDQQT ALLQYQRENL HFLSEEILCL QEKLSKYEQS
241 DDGSTPQVDL AHLLAARDQE LRTLSAEMNQ LQSELRLARS LIAERDAEVQ RVNSTNNQYI
301 EENERLRAIL SEWSMRAANL ERALEVERMS NSELQKEVAS TRRKQMLETT TSEQP
//