LOCUS AEC05990.1 536 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily
protein protein.
ACCESSION CP002685-837
PROTEIN_ID AEC05990.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G06000"
/gene_synonym="T6P5.20"
/gene_synonym="T6P5_20"
/inference="Similar to RNA sequence,
EST:INSD:ES191952.1,INSD:BP564307.1,INSD:ES024368.1,
INSD:ES133649.1,INSD:DR368819.1,INSD:ES136241.1,
INSD:BP572030.1,INSD:BP577846.1,INSD:EL990195.1,
INSD:AU236052.1,INSD:BP569624.1,INSD:EL092823.1,
INSD:DR359562.1,INSD:BP578142.1,INSD:ES096459.1,
INSD:EH890933.1,INSD:BP572889.1,INSD:ES190796.1,
INSD:AU226849.1,INSD:BP576482.1,INSD:ES012518.1,
INSD:ES078765.1,INSD:BP583122.1,INSD:BP844444.1,
INSD:EL073261.1,INSD:BP854103.2,INSD:AV540766.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX818956.1,INSD:AK228150.1"
/note="Pentatricopeptide repeat (PPR) superfamily protein;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR-like) superfamily
protein (TAIR:AT1G09900.1); Has 50374 Blast hits to 14280
proteins in 277 species: Archae - 4; Bacteria - 40;
Metazoa - 520; Fungi - 618; Plants - 47817; Viruses - 0;
Other Eukaryotes - 1375 (source: NCBI BLink)."
/db_xref="Araport:AT2G06000"
/db_xref="TAIR:AT2G06000"
BEGIN
1 MIRTTFATAI AHFHTHSHGG AQARPLQNNT REVIHCPEAW LVKIVSTLFV YRVPDSDLCF
61 CYLSKNLNPF ISFEVVKKLD NNPHIGFRFW EFSRFKLNIR HSFWTYNLLT RSLCKAGLHD
121 LAGQMFECMK SDGVSPNNRL LGFLVSSFAE KGKLHFATAL LLQSFEVEGC CMVVNSLLNT
181 LVKLDRVEDA MKLFDEHLRF QSCNDTKTFN ILIRGLCGVG KAEKALELLG VMSGFGCEPD
241 IVTYNTLIQG FCKSNELNKA SEMFKDVKSG SVCSPDVVTY TSMISGYCKA GKMREASSLL
301 DDMLRLGIYP TNVTFNVLVD GYAKAGEMLT AEEIRGKMIS FGCFPDVVTF TSLIDGYCRV
361 GQVSQGFRLW EEMNARGMFP NAFTYSILIN ALCNENRLLK ARELLGQLAS KDIIPQPFMY
421 NPVIDGFCKA GKVNEANVIV EEMEKKKCKP DKITFTILII GHCMKGRMFE AVSIFHKMVA
481 IGCSPDKITV SSLLSCLLKA GMAKEAYHLN QIARKGQSNN VVPLETKTAN ATLAAC
//