LOCUS AEC05962.1 532 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Nucleic acid-binding, OB-fold-like
protein protein.
ACCESSION CP002685-807
PROTEIN_ID AEC05962.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G05642"
/inference="Similar to RNA sequence,
EST:INSD:EG423116.1,INSD:EG423112.1,INSD:CB261997.1,
INSD:EG422881.1,INSD:EG423111.1,INSD:EG422703.1,
INSD:EG422880.1"
/note="Nucleic acid-binding, OB-fold-like protein;
CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold
(InterPro:IPR012340), Nucleic acid-binding, OB-fold-like
(InterPro:IPR016027), Protein of unknown function DUF223
(InterPro:IPR003871), Replication factor A, C-terminal
(InterPro:IPR013955); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G60920.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="Araport:AT2G05642"
/db_xref="TAIR:AT2G05642"
intron_pos 51:0 (1/10)
intron_pos 107:0 (2/10)
intron_pos 134:2 (3/10)
intron_pos 224:2 (4/10)
intron_pos 266:0 (5/10)
intron_pos 327:2 (6/10)
intron_pos 368:0 (7/10)
intron_pos 427:0 (8/10)
intron_pos 447:0 (9/10)
intron_pos 467:0 (10/10)
BEGIN
1 MPLEITPVSQ LHSHLSTCKV KVRIARLWAY HKKDRPKDIM GIDLLLVDDK GERIQASIRS
61 QLLSKFQEKL EEGDCYMIMN FEISDNGGSY RASSHPYKIN FMSMTHIIGM QELKEVNVSG
121 RQTKLLNLQL RDLGESVIDV TLWEKWAEDL YSYVKGYKDG SIVLVGSLMK IKTYFKNVYL
181 TFTIRDSLIW FLIFSRQDLC PKSSFSTKLF INSSIAEITE FKESLAKSDC LALTTISTIT
241 SSSSSKHSKP SFSLRDQKTI ADINSGGACN IIASIFSIDT KVPWFYIGCN ICFKKVSPYF
301 NPETEEIEAG KYECEKCDTF VTTTSTRFRV QVTVLDHTGE ASFLLFDQDV IKLIHKSAYE
361 LLEQQVQFNR SDKIPQELLD LEGRQFVFTI QGSDSTKFSR PSIFRVYELT DKPEIVQKFQ
421 ENLLQMNTTD PNTHMVSSFS NSTTSETEPD SDMNIVSTPS NATTNQIDTE SSEAANYENS
481 NSSIKTSKNT SKITKLTPTS KRALTSSKDN AAQKSSTKPK LLSKAEIKKE KK
//