LOCUS AEC05954.1 263 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TLD-domain containing nucleolar protein
protein.
ACCESSION CP002685-798
PROTEIN_ID AEC05954.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G05590"
/gene_synonym="T20G20.6"
/gene_synonym="T20G20_6"
/inference="Similar to RNA sequence,
EST:INSD:EG443006.1,INSD:EL218670.1,INSD:AV823653.1,
INSD:EG442981.1,INSD:EG443399.1,INSD:EG440745.1,
INSD:EG443008.1,INSD:AV784658.1,INSD:EL087916.1,
INSD:EG440742.1,INSD:EG443402.1,INSD:EG442979.1,
INSD:EG443406.1,INSD:EL157452.1,INSD:EG442985.1,
INSD:EG443408.1,INSD:EG443410.1,INSD:EG440744.1,
INSD:EG443002.1,INSD:EG442983.1"
/inference="similar to RNA sequence, mRNA:INSD:AY050773.1"
/note="TLD-domain containing nucleolar protein; FUNCTIONS
IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: TLDc
(InterPro:IPR006571); BEST Arabidopsis thaliana protein
match is: TLD-domain containing nucleolar protein
(TAIR:AT4G39870.2); Has 669 Blast hits to 669 proteins in
148 species: Archae - 0; Bacteria - 0; Metazoa - 372;
Fungi - 60; Plants - 112; Viruses - 0; Other Eukaryotes -
125 (source: NCBI BLink)."
/db_xref="Araport:AT2G05590"
/db_xref="TAIR:AT2G05590"
intron_pos 36:0 (1/5)
intron_pos 161:2 (2/5)
intron_pos 186:0 (3/5)
intron_pos 213:0 (4/5)
intron_pos 234:1 (5/5)
BEGIN
1 MHALKDKVSQ KLSNLFADSP SQSASPRYSN SDSPKARLNS SVGKSLSSYF SFVVPQSGNE
61 EDSELCPPLP IRTESYECIE NCKSANGQAK AGTFISIGED KDCELRVSAK VEESGNDYFD
121 GVKKMRELTE SSVFITANLF EFLHASLPNI VRGCKWILLY STLKHGISLR TLLRRSGELP
181 GPCLLVAGDK QGAVFGALLE CPLQPTPKRK YQGTSQTFLF TTIYGEPRIF RPTGANRYYL
241 MCMNEFLAFG GGGNFALCLD EDL
//