LOCUS AEC05927.1 265 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana MATH domain/coiled-coil protein protein.
ACCESSION CP002685-769
PROTEIN_ID AEC05927.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G05410"
/gene_synonym="F16J10.4"
/gene_synonym="F16J10_4"
/inference="Similar to RNA sequence,
EST:INSD:EG491194.1,INSD:EG491192.1,INSD:EG491210.1,
INSD:EG491195.1,INSD:EG491211.1,INSD:EG491224.1,
INSD:EG491225.1,INSD:EG491198.1,INSD:EG491199.1,
INSD:EG491213.1,INSD:EG491197.1,INSD:EG423619.1,
INSD:EG491205.1,INSD:EG491212.1,INSD:EG491201.1,
INSD:EG491214.1,INSD:EG491208.1,INSD:EG491206.1,
INSD:EG491200.1,INSD:EG491193.1,INSD:EG491209.1,
INSD:EG491216.1,INSD:EG491215.1"
/note="TRAF-like family protein; CONTAINS InterPro
DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH
(InterPro:IPR002083); BEST Arabidopsis thaliana protein
match is: TRAF-like family protein (TAIR:AT2G05420.1); Has
465 Blast hits to 417 proteins in 24 species: Archae - 2;
Bacteria - 0; Metazoa - 6; Fungi - 2; Plants - 446;
Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink)."
/db_xref="Araport:AT2G05410"
/db_xref="TAIR:AT2G05410"
intron_pos 53:1 (1/2)
intron_pos 128:0 (2/2)
BEGIN
1 MAYPKGINKA HDSFSLFLNV PDNESLPTGW RRHAKVSFSL VNQGSEKLSQ RKVTQHWFVQ
61 KAFTWGFPVM ITHTELNAKM GFLVNGELKV VAKIEVLEVV GKLDVSKESS PIMKTIDVNG
121 FQVLPSQVDS VKRLFEKNLD IVSKFRLKNP YLKTACMNLL LSLTETLCQS PQELSNDGLS
181 DAGVALAYLI ETGLKLDWLE KKLDELKEKK KKEESCLVRL REMDEQLQPF KKRCLDIEDQ
241 ISKEKEELLA AREPLSLYDD IDNNV
//