LOCUS AEC05906.1 467 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Nucleic acid-binding, OB-fold-like
protein protein.
ACCESSION CP002685-741
PROTEIN_ID AEC05906.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="AtPOT1a"
/locus_tag="AT2G05210"
/gene_synonym="ATPOT1"
/gene_synonym="F5G3.11"
/gene_synonym="F5G3_11"
/gene_synonym="Protection of Telomeres 1a"
/inference="Similar to RNA sequence,
EST:INSD:EG429693.1,INSD:EH951941.1,INSD:EL124310.1,
INSD:ES106731.1,INSD:EG429699.1,INSD:EH875531.1,
INSD:ES034782.1,INSD:EG429694.1,INSD:EG429700.1,
INSD:EG429695.1,INSD:ES108052.1,INSD:EL153070.1,
INSD:DR287055.1,INSD:ES078402.1,INSD:AV561841.1,
INSD:BP788984.1,INSD:DR287054.1,INSD:EL291964.1,
INSD:DR380341.1,INSD:ES080566.1,INSD:EG511585.1,
INSD:ES168709.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY884593.2,INSD:AY553323.1"
/note="Protection of Telomeres 1a (AtPOT1a); CONTAINS
InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like
(InterPro:IPR016027), Nucleic acid-binding, OB-fold
(InterPro:IPR012340), Telomere end binding protein
(InterPro:IPR011564); BEST Arabidopsis thaliana protein
match is: Nucleic acid-binding, OB-fold-like protein
(TAIR:AT5G06310.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/db_xref="Araport:AT2G05210"
/db_xref="TAIR:AT2G05210"
intron_pos 43:1 (1/9)
intron_pos 89:0 (2/9)
intron_pos 153:1 (3/9)
intron_pos 186:0 (4/9)
intron_pos 212:2 (5/9)
intron_pos 301:2 (6/9)
intron_pos 327:1 (7/9)
intron_pos 347:0 (8/9)
intron_pos 400:0 (9/9)
BEGIN
1 MAKKRESPKL IKIKDAIKLI NQQVSLIGIV LEQREPKQCR NNDWICTLRI IDDTYPSPGL
61 TVNVFSKTLE QLPQIKNHDD MILFTRIKMQ TFDSGERVNA ACSRWVSSFA LFEGVDFVCY
121 QCSTNFHEEE ALYKSAMDDL RKVFAGCSQV IKAMQSISYR TKPCSEVFSF LREIKIGKRF
181 DLVCRILHAD EDTSAVFVWD GTDAPPASIL AKRSEEDKAF SSLSVHTLLS RDVLLSFPTV
241 GTILRVHLSS HLFYRVKPGD WVKLYHLLCE VDRGSWVIKV TSSTKVHHLA QDDRLVEKIM
301 RIYDKRLSSK LGHISFWCFP SPPGLTETDD NCAPFVTLMD IITFPKVTCK YRCIVRVVAA
361 YPWQVEDFCS DENRRHHQVL LTLEDSTATL EAFLCNKDAE YFWGLGFQDT ETLRKKRNWL
421 LGIRESSNFV APRNPPWIEC CILSYYTNKA DPWNTRLYRI FGTRLLH
//