LOCUS AEC05890.1 392 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana scramblase-like protein protein.
ACCESSION CP002685-721
PROTEIN_ID AEC05890.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G04940"
/gene_synonym="F1O13.7"
/gene_synonym="F1O13_7"
/inference="Similar to RNA sequence,
EST:INSD:DR378733.1,INSD:DR297580.1,INSD:ES043091.1,
INSD:BP583324.1,INSD:BP833428.1,INSD:EL098490.1,
INSD:ES151275.1,INSD:DR297581.1,INSD:ES195729.1,
INSD:DR297578.1,INSD:BP637276.1,INSD:DR297577.1,
INSD:DR297579.1,INSD:AA712461.1,INSD:EL063094.1,
INSD:H76263.1,INSD:EL326441.1,INSD:BP823941.1,
INSD:CK118822.1,INSD:BP568756.1,INSD:EL129679.1,
INSD:BP838130.1,INSD:AV829330.1,INSD:BP831946.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819494.1,INSD:BX820003.1,INSD:BX818960.1,
INSD:AY093221.1,INSD:BX819562.1,INSD:BX820498.1,
INSD:AY084226.1,INSD:BT001240.1,INSD:BX819994.1,
INSD:BX819086.1,INSD:BX819621.1,INSD:BX820923.1"
/note="scramblase-related; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
plastid; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Scramblase (InterPro:IPR005552); Has 427 Blast hits to 416
proteins in 142 species: Archae - 0; Bacteria - 29;
Metazoa - 228; Fungi - 113; Plants - 38; Viruses - 0;
Other Eukaryotes - 19 (source: NCBI BLink)."
/db_xref="Araport:AT2G04940"
/db_xref="TAIR:AT2G04940"
intron_pos 38:0 (1/11)
intron_pos 162:0 (2/11)
intron_pos 191:0 (3/11)
intron_pos 205:0 (4/11)
intron_pos 220:0 (5/11)
intron_pos 242:0 (6/11)
intron_pos 261:0 (7/11)
intron_pos 281:2 (8/11)
intron_pos 322:0 (9/11)
intron_pos 348:0 (10/11)
intron_pos 383:2 (11/11)
BEGIN
1 MIYLSRRSLS SLLRSGFNLR GDLTAAAVSC SSLFSDADGG IKKLHSRAGN AVLWRNSQLC
61 SSQGSFFGRG GQVSGSVFRC FCSGSDTSPP SLDRKFLAQL WVADKKKLKA MEKRYKKASK
121 HRNYTENDGF DVHFETVEPT VEQPPVSQSM SGLLKPKTSD EAKIATLLAR SNLLVTRDIE
181 WANLVLGFEQ ENRYIVVDVC YPEAPVGSIR EQSNLLARQL LRTRRPFVAS ITDALGNELF
241 RVRRPFWWLT SSIYAEIDGE EIGVVHRRWH LWRRIYDLYL GNNQFAVVEN PGFWNWTFTV
301 KDADGEVLAQ IDRDWRGFGF EIFTDAGQYV IRFGKADAAA KTGPATLVEE LEVKRPLTLS
361 ERAVVLTLAI SLDNDYFSRH GGWGIPFMAV GE
//