LOCUS AEC05877.1 692 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002685-707
PROTEIN_ID AEC05877.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G04860"
/gene_synonym="F28I8.8"
/gene_synonym="F28I8_8"
/inference="Similar to RNA sequence, EST:INSD:EG457721.1"
/inference="similar to RNA sequence,
mRNA:INSD:DQ446469.1,INSD:DQ652961.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide
repeat (InterPro:IPR002885); BEST Arabidopsis thaliana
protein match is: Pentatricopeptide repeat (PPR)
superfamily protein (TAIR:AT1G18485.1); Has 40750 Blast
hits to 12883 proteins in 192 species: Archae - 0;
Bacteria - 0; Metazoa - 53; Fungi - 56; Plants - 40225;
Viruses - 0; Other Eukaryotes - 416 (source: NCBI BLink)."
/db_xref="Araport:AT2G04860"
/db_xref="TAIR:AT2G04860"
BEGIN
1 MRITKPITLY RDLSYFHSLL KSCIHGEISS SPITIFRDLL RSSLTPNHFT MSIFLQATTT
61 SFNSFKLQVE QVQTHLTKSG LDRFVYVKTS LLNLYLKKGC VTSAQMLFDE MPERDTVVWN
121 ALICGYSRNG YECDAWKLFI VMLQQGFSPS ATTLVNLLPF CGQCGFVSQG RSVHGVAAKS
181 GLELDSQVKN ALISFYSKCA ELGSAEVLFR EMKDKSTVSW NTMIGAYSQS GLQEEAITVF
241 KNMFEKNVEI SPVTIINLLS AHVSHEPLHC LVVKCGMVND ISVVTSLVCA YSRCGCLVSA
301 ERLYASAKQD SIVGLTSIVS CYAEKGDMDI AVVYFSKTRQ LCMKIDAVAL VGILHGCKKS
361 SHIDIGMSLH GYAIKSGLCT KTLVVNGLIT MYSKFDDVET VLFLFEQLQE TPLISWNSVI
421 SGCVQSGRAS TAFEVFHQMM LTGGLLPDAI TIASLLAGCS QLCCLNLGKE LHGYTLRNNF
481 ENENFVCTAL IDMYAKCGNE VQAESVFKSI KAPCTATWNS MISGYSLSGL QHRALSCYLE
541 MREKGLKPDE ITFLGVLSAC NHGGFVDEGK ICFRAMIKEF GISPTLQHYA LMVGLLGRAC
601 LFTEALYLIW KMDIKPDSAV WGALLSACII HRELEVGEYV ARKMFMLDYK NGGLYVLMSN
661 LYATEAMWDD VVRVRNMMKD NGYDGYLGVS QI
//