LOCUS AEC05840.1 495 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Cysteine/Histidine-rich C1 domain
family protein protein.
ACCESSION CP002685-640
PROTEIN_ID AEC05840.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G04500"
/gene_synonym="T1O3.9"
/gene_synonym="T1O3_9"
/inference="Similar to RNA sequence,
EST:INSD:EG430670.1,INSD:EG430687.1,INSD:EG430691.1,
INSD:EG430666.1,INSD:EG430668.1,INSD:EG430693.1,
INSD:AY649254.1,INSD:EG430655.1,INSD:EG430667.1,
INSD:EG430669.1,INSD:EG430688.1,INSD:EG430684.1,
INSD:EG430654.1,INSD:EG430671.1,INSD:EG430659.1,
INSD:EG430658.1,INSD:EG430689.1,INSD:EG430665.1,
INSD:EG430692.1,INSD:EG430690.1,INSD:EG430694.1,
INSD:EG430653.1"
/inference="similar to RNA sequence, mRNA:INSD:AY219112.1"
/note="Cysteine/Histidine-rich C1 domain family protein;
FUNCTIONS IN: zinc ion binding; INVOLVED IN:
biological_process unknown; LOCATED IN: intracellular;
EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc
finger, C2H2-like (InterPro:IPR015880), DC1
(InterPro:IPR004146), Zinc finger, PHD-type
(InterPro:IPR001965), Zinc finger, ZZ-type
(InterPro:IPR000433), C1-like (InterPro:IPR011424); BEST
Arabidopsis thaliana protein match is:
Cysteine/Histidine-rich C1 domain family protein
(TAIR:AT4G14980.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G04500"
/db_xref="TAIR:AT2G04500"
BEGIN
1 MRRDLRALPC SHFPKIFING NHDCHFCKID LSTTSLYARC TICNVNMDLD CMVNLPPLTI
61 FEPKHHKHSF NLLLRVVTFT CNACGLEGDR NPYVCYECHL MVHKDCIEGL PGVIYINRHD
121 HRVSHTFHLG QEERDWECGV CRRTIDWVYG AYTCSLCPSY AVHSKCATRK EVWDGRELED
181 VSEEDEEIED PFKVINETDI IHFSHEEHVL RLDENCHMEN DATRCRGCIL AINGNLSYKC
241 LECDFIIHKV CASLPRKRRH FLHNHKLTLR VDKASIFLCS TCDTTPNGFR YECDEDHGDE
301 EFVFDLQCSS ISEPFLHDLH PHPLYWTLEH SKKCKACGTK AGYDLNCIVC DDYSLCMTCA
361 TLPSKVKHRC DDHLLSLRQG ASDFDTGHLW CDICETKTDP SVFYYTCDDC GVSLHLKCVL
421 GDLYNAKLGL IDPRDPAHEV LPNNGVTRPF CFHCELRCKF PFLIRRATEE FTLYYCSLNC
481 CLEAAFYIPP VTDEG
//