LOCUS AEC05831.1 402 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Aldolase-type TIM barrel family protein
protein.
ACCESSION CP002685-630
PROTEIN_ID AEC05831.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G04400"
/inference="Similar to RNA sequence,
EST:INSD:AV535684.1,INSD:DR378987.1,INSD:EH904387.1,
INSD:DR298131.1,INSD:AU229519.1,INSD:EH921368.1,
INSD:EH942750.1,INSD:EL089345.1,INSD:AV439890.1,
INSD:EL106675.1,INSD:DR298128.1,INSD:EH894158.1,
INSD:DR298120.1,INSD:DR298125.1,INSD:EH917614.1,
INSD:DR298133.1,INSD:DR298129.1,INSD:EL294852.1,
INSD:EL162876.1,INSD:AU238346.1,INSD:EL076290.1,
INSD:EL218158.1,INSD:BP664948.1,INSD:BP668324.1,
INSD:EG440694.1,INSD:BP861672.1,INSD:DR298124.1,
INSD:DR298119.1,INSD:BP610378.1,INSD:DR298132.1,
INSD:EL065800.1,INSD:AW004474.1,INSD:DR298123.1,
INSD:EL178179.1,INSD:DR298121.1,INSD:ES069122.1,
INSD:EL127496.1,INSD:BP861452.1,INSD:BP668733.1,
INSD:EL037774.1,INSD:AV564459.1,INSD:DR298126.1,
INSD:EL104090.1,INSD:DR298130.1,INSD:CD534394.1,
INSD:DR298127.1,INSD:DR298122.1,INSD:EG447234.1,
INSD:DR298134.1,INSD:AV548563.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX820386.1,INSD:AY086973.1,INSD:U18770.1,
INSD:AK117503.1,INSD:BT025969.1,INSD:BX819822.1"
/note="Aldolase-type TIM barrel family protein; FUNCTIONS
IN: indole-3-glycerol-phosphate synthase activity, copper
ion binding; INVOLVED IN: tryptophan biosynthetic process;
LOCATED IN: chloroplast; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Aldolase-type TIM barrel
(InterPro:IPR013785), Ribulose-phosphate binding barrel
(InterPro:IPR011060), Indole-3-glycerol phosphate
synthase, conserved site (InterPro:IPR001468),
Indole-3-glycerol phosphate synthase (InterPro:IPR013798);
BEST Arabidopsis thaliana protein match is: Aldolase-type
TIM barrel family protein (TAIR:AT5G48220.1); Has 8050
Blast hits to 8050 proteins in 2237 species: Archae - 197;
Bacteria - 5328; Metazoa - 3; Fungi - 164; Plants - 82;
Viruses - 0; Other Eukaryotes - 2276 (source: NCBI
BLink)."
/db_xref="Araport:AT2G04400"
/db_xref="TAIR:AT2G04400"
intron_pos 56:0 (1/9)
intron_pos 144:0 (2/9)
intron_pos 203:0 (3/9)
intron_pos 228:0 (4/9)
intron_pos 243:0 (5/9)
intron_pos 298:0 (6/9)
intron_pos 324:1 (7/9)
intron_pos 352:0 (8/9)
intron_pos 375:0 (9/9)
BEGIN
1 MEGLVPVQRL PIKVASPSLY RCNNSVSIRR SISGFAMDRK INFRAPSQFS IRAQQSDLKE
61 SLAVSSSSVE DKGNVLRIKE WEVEMYQEEL AISQGIRIRR KPPSKAPLGY SGPFELRLHN
121 NDADSPRNIL EEITWYKDVE VSRMKELNPL DVLKKAVEDA PPTRDFVGAL RMAHKRTGFP
181 GLIAEVKKAS PSRGILKENF DPVEIAQAYE KGGAACLSVL TDQKYFQGGF ENLEAIRSAG
241 VKCPLLCKEF VVDPWQIYYA RTKGADAVLL IAAVLADLEI TFLLKICKKL SLAALVEVHD
301 EREMGRVLGI EGIELVGINN RSLETFEVDI SNTKKLLEGE HGRQIRERDM IVVGESGLFT
361 PDDIAYVQAA GVKAVLVGES IVKQNDPEKG IAGLFGRNIS HT
//