LOCUS AEC05822.1 720 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana AMP-dependent synthetase and ligase
family protein protein.
ACCESSION CP002685-615
PROTEIN_ID AEC05822.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="LACS8"
/locus_tag="AT2G04350"
/gene_synonym="long-chain acyl-CoA synthetase 8"
/gene_synonym="T23O15.3"
/gene_synonym="T23O15_3"
/inference="Similar to RNA sequence,
EST:INSD:BP599107.1,INSD:DR364576.1,INSD:T13791.1,
INSD:EL290089.1,INSD:DR364578.1,INSD:AV795297.1,
INSD:BP793240.1,INSD:AV783589.1,INSD:EH872153.1,
INSD:EH959858.1,INSD:DR364565.1,INSD:AV794891.1,
INSD:BP568984.1,INSD:DR364571.1,INSD:DR364566.1,
INSD:DR364574.1,INSD:DR364579.1,INSD:EL970395.1,
INSD:DR364580.1,INSD:DR364573.1,INSD:EL967320.1,
INSD:DR364575.1,INSD:AV526744.1,INSD:CB257501.1,
INSD:DR364567.1,INSD:BP620721.1,INSD:EH902036.1,
INSD:ES019474.1,INSD:AV822758.1,INSD:AV815145.1,
INSD:ES140545.1,INSD:AV787207.1,INSD:AV552610.1,
INSD:BP634845.1,INSD:AV824672.1,INSD:EL980077.1,
INSD:EL968671.1,INSD:EL226162.1,INSD:EL331865.1,
INSD:DR364568.1,INSD:DR364572.1,INSD:ES186747.1,
INSD:EH913914.1,INSD:BP792069.1,INSD:DR364577.1,
INSD:DR364569.1,INSD:ES188330.1,INSD:BP788863.1,
INSD:AV808905.1,INSD:BP790441.1,INSD:EL145598.1,
INSD:DR364564.1,INSD:BP571430.1,INSD:AV805389.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF503758.1,INSD:BT002288.1,INSD:AY052664.1,
INSD:AK226296.1"
/note="long-chain acyl-CoA synthetase 8 (LACS8); FUNCTIONS
IN: long-chain fatty acid-CoA ligase activity, catalytic
activity; INVOLVED IN: fatty acid biosynthetic process,
metabolic process; LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding,
conserved site (InterPro:IPR020845), AMP-dependent
synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis
thaliana protein match is: long chain acyl-CoA synthetase
9 (TAIR:AT1G77590.1); Has 68120 Blast hits to 56487
proteins in 3592 species: Archae - 1085; Bacteria - 46156;
Metazoa - 2682; Fungi - 3484; Plants - 2089; Viruses - 2;
Other Eukaryotes - 12622 (source: NCBI BLink)."
/db_xref="Araport:AT2G04350"
/db_xref="TAIR:AT2G04350"
intron_pos 173:0 (1/10)
intron_pos 200:0 (2/10)
intron_pos 291:0 (3/10)
intron_pos 335:0 (4/10)
intron_pos 393:0 (5/10)
intron_pos 469:2 (6/10)
intron_pos 509:0 (7/10)
intron_pos 553:0 (8/10)
intron_pos 598:0 (9/10)
intron_pos 667:0 (10/10)
BEGIN
1 MEDSGVNPMD SPSKGSDFGV YGIIGGGIVA LLVPVLLSVV LNGTKKGKKR GVPIKVGGEE
61 GYTMRHARAP ELVDVPWEGA ATMPALFEQS CKKYSKDRLL GTREFIDKEF ITASDGRKFE
121 KLHLGEYKWQ SYGEVFERVC NFASGLVNVG HNVDDRVAIF SDTRAEWFIA FQGCFRQSIT
181 VVTIYASLGE EALIYSLNET RVSTLICDSK QLKKLSAIQS SLKTVKNIIY IEEDGVDVAS
241 SDVNSMGDIT VSSISEVEKL GQKNAVQPIL PSKNGVAVIM FTSGSTGLPK GVMITHGNLV
301 ATAAGVMKVV PKLDKNDTYI AYLPLAHVFE LEAEIVVFTS GSAIGYGSAM TLTDTSNKVK
361 KGTKGDVSAL KPTIMTAVPA ILDRVREGVL KKVEEKGGMA KTLFDFAYKR RLAAVDGSWF
421 GAWGLEKMLW DALVFKKIRA VLGGHIRFML VGGAPLSPDS QRFINICMGS PIGQGYGLTE
481 TCAGATFSEW DDPAVGRVGP PLPCGYVKLV SWEEGGYRIS DKPMPRGEIV VGGNSVTAGY
541 FNNQEKTDEV YKVDEKGTRW FYTGDIGRFH PDGCLEVIDR KKDIVKLQHG EYVSLGKVEA
601 ALGSSNYVDN IMVHADPINS YCVALVVPSR GALEKWAEEA GVKHSEFAEL CEKGEAVKEV
661 QQSLTKAGKA AKLEKFELPA KIKLLSEPWT PESGLVTAAL KIKREQIKSK FKDELSKLYA
//