LOCUS AEC05807.1 411 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TRAF-like family protein protein.
ACCESSION CP002685-592
PROTEIN_ID AEC05807.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G04190"
/gene_synonym="T16B23.4"
/gene_synonym="T16B23_4"
/inference="Similar to RNA sequence, EST:INSD:BX840506.1"
/inference="similar to RNA sequence, mRNA:INSD:BX819779.1"
/note="TRAF-like family protein; CONTAINS InterPro
DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH
(InterPro:IPR002083); BEST Arabidopsis thaliana protein
match is: TRAF-like family protein (TAIR:AT2G04170.2); Has
35333 Blast hits to 34131 proteins in 2444 species: Archae
- 798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink)."
/db_xref="Araport:AT2G04190"
/db_xref="TAIR:AT2G04190"
intron_pos 110:1 (1/5)
intron_pos 152:2 (2/5)
intron_pos 209:1 (3/5)
intron_pos 302:2 (4/5)
intron_pos 358:1 (5/5)
BEGIN
1 MEIVGHRGGW GDFPGKGVGS CVFGGGGGGP AFGGRGGGPG RGYGGGPRVH GPGYGIGSRG
61 PDPGPGFFFG GAGPGPGYGG GGGHGPGYGG GGDGRGYGSE TGGGNHGPEV TRTLRDEPPS
121 HRILTITNFS EIIGREEPYE SSVFEAYFEH KWRLILYVNG NQNDGGSNHI SLYLRSEETD
181 HLTYDGSINF VLKLFVYNGK QDKYLTVTDG IQKRYNYKNK EWGYGKLIPL STFLDTSQGY
241 LEQDTASFGA EIFLCPPIQV QEKVTFISNP PNNVFTWKIL HFSTLEDIVY YSDDFLVEDR
301 YWRLGVNPKG TGDGRSQAIK IFLYAQGHKP NAVVSSTWGA VNLRVKNQRS SNHSQIYSAA
361 LYPIRNDYGV GVNTVLSLAE LNDAVKEYLV NDSIIFEAEM VKVSVTNIVP I
//