LOCUS AEC05788.1 199 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DUF2996 family protein protein.
ACCESSION CP002685-569
PROTEIN_ID AEC05788.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G04039"
/gene_synonym="F3L12.11"
/gene_synonym="F3L12_11"
/inference="Similar to RNA sequence,
EST:INSD:EH862814.1,INSD:EL203140.1,INSD:EL210871.1,
INSD:EH844177.1,INSD:EH826296.1,INSD:EH861594.1,
INSD:EL055829.1,INSD:DR320513.1,INSD:DR320515.1,
INSD:EH917548.1,INSD:EH825434.1,INSD:EL020456.1,
INSD:EL291173.1,INSD:EL266516.1,INSD:EL226436.1,
INSD:EL292593.1,INSD:EH919257.1,INSD:EL029666.1,
INSD:AU231394.1,INSD:EL091891.1,INSD:DR320516.1,
INSD:EH886521.1,INSD:DR320520.1,INSD:BP860589.1,
INSD:DR320519.1,INSD:EL020044.1,INSD:EL088825.1,
INSD:DR320521.1,INSD:EH917073.1,INSD:DR231060.1,
INSD:AV815255.1,INSD:EH884838.1,INSD:DR374409.1,
INSD:EH973317.1,INSD:EH975520.1,INSD:EH806839.1,
INSD:BP849892.1,INSD:EH809487.1,INSD:EL088804.1,
INSD:EL119394.1,INSD:EL333575.1,INSD:EH841306.1,
INSD:BP854225.1,INSD:EL004230.1,INSD:BE526280.1,
INSD:AV802376.1,INSD:DR320518.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY058049.1,INSD:AY090294.1,INSD:AY086868.1"
/note="unknown protein; FUNCTIONS IN: molecular_function
unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF2996
(InterPro:IPR021374); Has 159 Blast hits to 159 proteins
in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0;
Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45
(source: NCBI BLink)."
/db_xref="Araport:AT2G04039"
/db_xref="TAIR:AT2G04039"
intron_pos 35:0 (1/4)
intron_pos 56:1 (2/4)
intron_pos 125:0 (3/4)
intron_pos 149:1 (4/4)
BEGIN
1 MATIAGGSFG VPSSRISITT PTLSSSSLLP PLTLQSGTRK DNLLRCALQE SSTSAVATEK
61 KNKEEGEEST VAVPAKKPKP AAKAAAVAKP LRQMMEEDVI PPLQAILESQ DDISDIDLSF
121 QDDKLEGFFL KKSIPYSFWA FFPTGNLTGA KGFSISSHGS GPSTVEPFLV DERKPTANHV
181 VFWVEKRLAA QGIIPVWNQ
//