LOCUS AEC05750.1 439 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 18S pre-ribosomal assembly protein
gar2-like protein protein.
ACCESSION CP002685-523
PROTEIN_ID AEC05750.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G03810"
/gene_synonym="T18C20.1"
/gene_synonym="T18C20_1"
/inference="Similar to RNA sequence,
EST:INSD:EL980296.1,INSD:ES107947.1,INSD:ES150753.1,
INSD:ES052509.1,INSD:EH982618.1,INSD:ES136837.1,
INSD:ES002298.1,INSD:EH843436.1,INSD:EL196942.1,
INSD:EG442919.1,INSD:EL017466.1,INSD:ES027828.1,
INSD:EL985057.1,INSD:EG442955.1,INSD:ES152993.1,
INSD:AV563468.1,INSD:EL968733.1,INSD:EG442948.1,
INSD:EG442967.1,INSD:EG442952.1,INSD:ES073718.1,
INSD:ES006903.1,INSD:EL302180.1,INSD:ES108405.1,
INSD:EG442950.1,INSD:ES004288.1,INSD:ES075319.1,
INSD:ES052729.1,INSD:ES147973.1,INSD:ES190438.1,
INSD:DR209515.1,INSD:EG442973.1,INSD:ES165729.1"
/inference="similar to RNA sequence, mRNA:INSD:AF517846.1"
/note="18S pre-ribosomal assembly protein gar2-related;
FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN: plasma
membrane; EXPRESSED IN: cotyledon; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G13650.1); Has 7945 Blast hits to 4358 proteins
in 575 species: Archae - 23; Bacteria - 2851; Metazoa -
1872; Fungi - 665; Plants - 238; Viruses - 54; Other
Eukaryotes - 2242 (source: NCBI BLink)."
/db_xref="Araport:AT2G03810"
/db_xref="TAIR:AT2G03810"
intron_pos 4:1 (1/3)
intron_pos 283:0 (2/3)
intron_pos 405:2 (3/3)
BEGIN
1 MRADNDHALG NSIEICKDES KPHQCLDENW EDAELKVPEN GKNNNNVCEL FYDTRSGEEW
61 ENEAGKKVRD TSHDCDANVD SPEKKDPVFY MDKNVTACDL PEIVVCYKEN TYHIVKDICV
121 DEGVPVQEKF LFGEKDSVKS SSTEDLMKAD KTNVNPSETK SAEDSISKVD DSEFCNDHKT
181 DRDVEESSGE DFADAEGTSS NYNQEHLIVT EEVKASPTHG LSPSEIEPDE NSKDEVAISQ
241 DNDSKECLTL GDILSREDEQ KSLNQDNISS DSHEEQSPSQ LQDKEKRSLE TTAIETELEK
301 TEEPKQGEEK LSSVSTTTSQ EPNKTCNEPE KPETENHHQQ NCLVENSYED DKFSSSRFGE
361 TSFSAADSVS ISGHITYSGP IAYSGSLSVR SDASTTSGRS FAFPILQSEW NSSPVRMAKA
421 DKRRQKGGWR HTLLCCRFS
//