LOCUS AEC05740.1 187 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana K-box region and MADS-box transcription
factor family protein protein.
ACCESSION CP002685-506
PROTEIN_ID AEC05740.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SEP4"
/locus_tag="AT2G03710"
/gene_synonym="AGAMOUS-like 3"
/gene_synonym="AGL3"
/gene_synonym="F19B11.16"
/gene_synonym="F19B11_16"
/gene_synonym="MADS BOX PROTEIN"
/gene_synonym="SEPALLATA 4"
/inference="Similar to RNA sequence,
EST:INSD:DR750712.1,INSD:BU636533.1,INSD:BP791144.1,
INSD:AV441647.1,INSD:AV801226.1,INSD:AV828127.1,
INSD:BX837240.1,INSD:EL167064.1,INSD:DR750713.1"
/inference="similar to RNA sequence, mRNA:INSD:AY141229.1"
/note="SEPALLATA 4 (SEP4); FUNCTIONS IN: DNA binding,
sequence-specific DNA binding transcription factor
activity; INVOLVED IN: in 6 processes; LOCATED IN:
nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Transcription factor, MADS-box (InterPro:IPR002100),
Transcription factor, K-box (InterPro:IPR002487); BEST
Arabidopsis thaliana protein match is: K-box region and
MADS-box transcription factor family protein
(TAIR:AT5G15800.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G03710"
/db_xref="TAIR:AT2G03710"
intron_pos 62:2 (1/5)
intron_pos 90:0 (2/5)
intron_pos 110:2 (3/5)
intron_pos 144:0 (4/5)
intron_pos 158:0 (5/5)
BEGIN
1 MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEIALLIFSN RGKLYEFCSS
61 PSGMARTVDK YRKHSYATMD PNQSAKDLQD KYQDYLKLKS RVEILQHSQR HLLGEELSEM
121 DVNELEHLER QVDASLRQIR STKARSMLDQ LSDLKTKEEM LLETNRDLRR KVAIGIFYRK
181 KLKPFVI
//