LOCUS AEC05734.1 603 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana cell division cycle 48B protein.
ACCESSION CP002685-498
PROTEIN_ID AEC05734.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="CDC48B"
/locus_tag="AT2G03670"
/gene_synonym="cell division cycle 48B"
/gene_synonym="F19B11.12"
/gene_synonym="F19B11_12"
/gene_synonym="T4D2.160"
/inference="Similar to RNA sequence,
EST:INSD:EG495221.1,INSD:DR378729.1,INSD:AV825787.1,
INSD:BP633521.1,INSD:AV792410.1,INSD:BP662117.1,
INSD:BP779576.1,INSD:DR243354.1,INSD:BX836882.1,
INSD:ES177212.1,INSD:BP857510.1,INSD:EG495220.1,
INSD:BP848828.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY062443.1,INSD:BX818798.1,INSD:BX821039.1,
INSD:BT008371.1"
/note="cell division cycle 48B (CDC48B); FUNCTIONS IN:
nucleoside-triphosphatase activity, ATPase activity,
nucleotide binding, ATP binding; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: ATPase, AAA-type, core
(InterPro:IPR003959), ATPase, AAA+ type, core
(InterPro:IPR003593), ATPase, AAA-type, conserved site
(InterPro:IPR003960); BEST Arabidopsis thaliana protein
match is: ATPase, AAA-type, CDC48 protein
(TAIR:AT3G53230.1); Has 56751 Blast hits to 29677 proteins
in 3123 species: Archae - 2145; Bacteria - 19832; Metazoa
- 8766; Fungi - 6476; Plants - 5731; Viruses - 66; Other
Eukaryotes - 13735 (source: NCBI BLink)."
/db_xref="Araport:AT2G03670"
/db_xref="TAIR:AT2G03670"
intron_pos 55:0 (1/11)
intron_pos 70:0 (2/11)
intron_pos 88:2 (3/11)
intron_pos 138:2 (4/11)
intron_pos 173:2 (5/11)
intron_pos 207:0 (6/11)
intron_pos 296:0 (7/11)
intron_pos 352:2 (8/11)
intron_pos 395:2 (9/11)
intron_pos 426:0 (10/11)
intron_pos 452:0 (11/11)
BEGIN
1 MLETESSVCD NIAGNEKWRA EAEIGGNERA LQALRELIIF PFRYPLEART LGLKWPRGLL
61 LYGPPGTGKT SLVRAVVQEC DAHLIVLSPH SVHRAHAGES EKVLREAFAE ASSHAVSDKP
121 SVIFIDEIDV LCPRRDARRE QDVRIASQLF TLMDSNKPSS SAPRVVVVAS TNRVDAIDPA
181 LRRAGRFDAL VEVSTPNEED RLKILQLYTK KVNLDPSVDL QAIAISCNGY VGADLEALCR
241 EATISASKRS SDSLILTSQD FKIAKSVVGP SINRGITVEI PKVTWDDVGG LKDLKKKLQQ
301 AVEWPIKHSA AFVKMGISPM RGILLHGPPG CSKTTLAKAA ANAAQASFFS LSCAELFSMY
361 VGEGEALLRN TFQRARLASP SIIFFDEADV VACKRGDESS SNSSTVGERL LSTLLTEMDG
421 LEEAKGILVL AATNRPYAID AALMRPGRFD LVLYVPPPDL EARFEILQVH TRNMTLGDDV
481 DLRKIAEETD LFTGAELEGL CRESGTVSLR ENIAATAVFN RHFQTAKSSL KPALTIEEVE
541 TYSSFRKAAK RSDSKPIPIN KKKATSTVFG FSWQLGVLSL LLLATGNYYF NHTKHELLVA
601 SAT
//