LOCUS AEC05707.1 432 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Homeodomain-like superfamily protein protein.
ACCESSION CP002685-460
PROTEIN_ID AEC05707.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G03500"
/gene_synonym="EARLY FLOWERING MYB PROTEIN"
/gene_synonym="EFM"
/gene_synonym="T4M8.7"
/gene_synonym="T4M8_7"
/inference="Similar to RNA sequence,
EST:INSD:AV830483.1,INSD:EG518558.1,INSD:EG504590.1,
INSD:EG518559.1,INSD:EG504589.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819077.1,INSD:AY060559.1,INSD:AK221662.1,
INSD:AY133630.1"
/note="Homeodomain-like superfamily protein; CONTAINS
InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057),
Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional
regulator, Myb-type, DNA-binding (InterPro:IPR017930),
Myb-like DNA-binding domain, SHAQKYF class
(InterPro:IPR006447), Homeodomain-related
(InterPro:IPR012287); BEST Arabidopsis thaliana protein
match is: myb-like transcription factor family protein
(TAIR:AT1G68670.1); Has 20396 Blast hits to 7290 proteins
in 193 species: Archae - 14; Bacteria - 20; Metazoa - 401;
Fungi - 967; Plants - 1637; Viruses - 8; Other Eukaryotes
- 17349 (source: NCBI BLink)."
/db_xref="Araport:AT2G03500"
/db_xref="TAIR:AT2G03500"
intron_pos 67:1 (1/3)
intron_pos 258:1 (2/3)
intron_pos 284:0 (3/3)
BEGIN
1 MASSSELSLD CKPQSYSMLL KSFGDNFQSD PTTHKLEDLL SRLEQERLKI DAFKRELPLC
61 MQLLNNAVEV YKQQLEAYRA NSNNNNQSVG TRPVLEEFIP LRNQPEKTNN KGSNWMTTAQ
121 LWSQSETKPK NIDSTTDQSL PKDEINSSPK LGHFDAKQRN GSGAFLPFSK EQSLPELALS
181 TEVKRVSPTN EHTNGQDGND ESMINNDNNY NNNNNNNSNS NGVSSTTSQS NRKARRCWSP
241 DLHRRFVQAL QMLGGSQVAT PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPSPSPQTSG
301 GPGPHLVVLG GIWVPPEYTS AHGGTPTLYH HQVHHHHTNT AGPPPPHFCS SQEFYTTPPP
361 PQPLHHHHFQ TFNGSSGGTA STDSTHHQVT DSPTVEGKSP ESGGGERKGL AALREECEDH
421 SNINGSEITL KF
//