LOCUS AEC05681.1 639 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA-binding protein protein.
ACCESSION CP002685-426
PROTEIN_ID AEC05681.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G03270"
/gene_synonym="T4M8.30"
/gene_synonym="T4M8_30"
/inference="Similar to RNA sequence,
EST:INSD:EG453425.1,INSD:EH895273.1,INSD:EL165021.1,
INSD:DR360480.1,INSD:EH813736.1,INSD:BP571840.1,
INSD:AV562487.1,INSD:EL299327.1,INSD:AV784668.1,
INSD:EG425665.1,INSD:BP810442.1,INSD:EL280979.1,
INSD:AI999267.1,INSD:AV562485.1,INSD:BP574200.1,
INSD:BP571679.1,INSD:BP620167.1,INSD:EH815100.1,
INSD:EG453424.1,INSD:BP593609.1,INSD:AV560298.1,
INSD:CD530639.1,INSD:AU227348.1,INSD:EL164178.1,
INSD:BP617210.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY091361.1,INSD:BX819353.1,INSD:AJ300306.1,
INSD:AY045820.1,INSD:BX842029.1"
/note="DNA-binding protein, putative; FUNCTIONS IN:
hydrolase activity, nucleoside-triphosphatase activity,
DNA binding, nucleotide binding, ATP binding; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: ATPase, AAA+ type, core
(InterPro:IPR003593), Restriction endonuclease, type I, R
subunit/Type III, Res subunit (InterPro:IPR006935), DNA
helicase, putative (InterPro:IPR004483), DEAD-like
helicase, N-terminal (InterPro:IPR014001); BEST
Arabidopsis thaliana protein match is: P-loop containing
nucleoside triphosphate hydrolases superfamily protein
(TAIR:AT5G35970.1); Has 6736 Blast hits to 5857 proteins
in 1106 species: Archae - 209; Bacteria - 2506; Metazoa -
1275; Fungi - 1034; Plants - 659; Viruses - 7; Other
Eukaryotes - 1046 (source: NCBI BLink)."
/db_xref="Araport:AT2G03270"
/db_xref="TAIR:AT2G03270"
BEGIN
1 MARKMSLEAF VSTMAPLIDM EKEAEISMSL TSGASRNIET AQKKGTTILN LKCVDVQTGL
61 MGKSLIEFQS NKGDVLPAHK FGNHDVVVLK LNKSDLGSSP LAQGVVYRLK DSSITVVFDE
121 VPEEGLNTSL RLEKLANEVT YRRMKDTLIQ LSKGVLRGPA SDLVPVLFGE RQPSVSKKDV
181 KSFTPFNKNL DQSQKDAITK ALSSKDVFLL HGPPGTGKTT TVVEIVLQEV KRGSKILACA
241 ASNIAVDNIV ERLVPHKVKL VRVGHPARLL PQVLDSALDA QVLKGDNSGL ANDIRKEMKA
301 LNGKLLKAKD KNTRRLIQKE LRTLGKEERK RQQLAVSDVI KNADVILTTL TGALTRKLDN
361 RTFDLVIIDE GAQALEVACW IALLKGSRCI LAGDHLQLPP TIQSAEAERK GLGRTLFERL
421 ADLYGDEIKS MLTVQYRMHE LIMNWSSKEL YDNKITAHSS VASHMLFDLE NVTKSSSTEA
481 TLLLVDTAGC DMEEKKDEEE STYNEGEAEV AMAHAKRLME SGVQPSDIGI ITPYAAQVML
541 LRILRGKEEK LKDMEISTVD GFQGREKEAI IISMVRSNSK KEVGFLKDQR RMNVAVTRSR
601 RQCCIVCDTE TVSSDAFLKR MIEYFEEHGE YLSASEYTN
//