LOCUS AEC05664.1 153 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana putative RNA-binding protein protein.
ACCESSION CP002685-394
PROTEIN_ID AEC05664.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G03110"
/gene_synonym="T18E12.22"
/gene_synonym="T18E12_22"
/inference="Similar to RNA sequence,
EST:INSD:AV566598.1,INSD:AV562732.1,INSD:ES107457.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT012113.1,INSD:BT012369.1"
/note="RNA binding;nucleic acid binding; FUNCTIONS IN: RNA
binding, nucleic acid binding; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1,
subgroup (InterPro:IPR018111), K Homology
(InterPro:IPR004087), K Homology, type 1
(InterPro:IPR004088); BEST Arabidopsis thaliana protein
match is: RNA-binding KH domain-containing protein
(TAIR:AT1G14170.3); Has 983 Blast hits to 801 proteins in
106 species: Archae - 0; Bacteria - 0; Metazoa - 424;
Fungi - 55; Plants - 493; Viruses - 0; Other Eukaryotes -
11 (source: NCBI BLink)."
/db_xref="Araport:AT2G03110"
/db_xref="TAIR:AT2G03110"
intron_pos 128:0 (1/1)
BEGIN
1 MRVNEALPGC DERVVTIYSN SEERNRIEDD NEDFVCPAFD ALFKVHDMVV VEEFDDDDDY
61 NDNDEYSEGQ TVVTVRMLVP SDQIGYLIGK GGPIIQTLRN DTNAQIRVRN DNLPMCALAL
121 SHDELLQIIG DPSAVREALY QVAFLLYNNP SRF
//