LOCUS AEC05646.1 271 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/FYVE/PHD zinc finger superfamily
protein protein.
ACCESSION CP002685-368
PROTEIN_ID AEC05646.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G02960"
/gene_synonym="T17M13.13"
/gene_synonym="T17M13_13"
/inference="Similar to RNA sequence,
EST:INSD:BP575210.1,INSD:BP649902.1,INSD:T43132.1,
INSD:AV549089.1,INSD:EG498713.1,INSD:N97117.1,
INSD:BP565643.1,INSD:BP629385.1,INSD:DR371854.1,
INSD:BP810582.2,INSD:EG498712.1,INSD:ES098142.1,
INSD:DR207718.1,INSD:AV558523.1,INSD:BP628572.1,
INSD:AI099758.1,INSD:BP620202.1,INSD:BP657682.1,
INSD:T43689.1,INSD:AI994460.1,INSD:BE526301.1,
INSD:BP577960.1,INSD:AV551072.1,INSD:BP569581.1,
INSD:ES007690.1,INSD:AV808780.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY091335.1,INSD:BX821079.1"
/note="RING/FYVE/PHD zinc finger superfamily protein;
FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF3675
(InterPro:IPR022143), Zinc finger, C3HC4 RING-type
(InterPro:IPR018957), Zinc finger, RING-CH-type
(InterPro:IPR011016); BEST Arabidopsis thaliana protein
match is: RING/FYVE/PHD zinc finger superfamily protein
(TAIR:AT1G14260.2); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G02960"
/db_xref="TAIR:AT2G02960"
intron_pos 67:0 (1/6)
intron_pos 91:0 (2/6)
intron_pos 113:2 (3/6)
intron_pos 164:0 (4/6)
intron_pos 193:0 (5/6)
intron_pos 223:0 (6/6)
BEGIN
1 MSPVNAEVEE MRSESPVVND KALDISDDDH DDENEPLIVS GECRICSDES PVENLESPCA
61 CSGSLKYAHR KCVQRWCNEK GNIICEICHQ PYQPGYTAPP PPLQPEETTI DIGGGWTISG
121 LDVHDPRLLA IAEAERRYLE SEYVEYTASS ASGAAFCRSA ALILMALLLL RHALTITDDT
181 DGEEDDPSSI LSLVLLRAAG FLLPCYIMAW AISILQRRRQ RQEAAALATQ FALVLQSGQP
241 RTVHFTVSPG ISSSAVAHAT TSTQQQHDDP V
//