LOCUS AEC05598.1 300 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana nucleic acid binding/RNA binding
protein protein.
ACCESSION CP002685-302
PROTEIN_ID AEC05598.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G02570"
/gene_synonym="T8K22.13"
/gene_synonym="T8K22_13"
/inference="Similar to RNA sequence,
EST:INSD:EG500646.1,INSD:DR215244.1,INSD:DR215240.1,
INSD:ES126996.1,INSD:ES176255.1,INSD:AV440578.1,
INSD:DR377431.1,INSD:DR215248.1,INSD:DR215247.1,
INSD:CB255176.1,INSD:ES043754.1,INSD:DR215243.1,
INSD:AI997320.1,INSD:EL159352.1,INSD:BP652590.1,
INSD:CB254470.1,INSD:DR215246.1,INSD:EH819728.1,
INSD:ES121754.1,INSD:ES041958.1,INSD:DR215242.1,
INSD:ES125496.1,INSD:DR215239.1,INSD:DR215241.1,
INSD:AU236397.1"
/inference="similar to RNA sequence, mRNA:INSD:BT004365.1"
/note="nucleic acid binding;RNA binding; FUNCTIONS IN: RNA
binding, nucleic acid binding; INVOLVED IN: mRNA
processing; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 14 growth stages;
CONTAINS InterPro DOMAIN/s: Tudor subgroup
(InterPro:IPR018351), Tudor domain (InterPro:IPR002999),
Survival motor neuron (InterPro:IPR010304); Has 339 Blast
hits to 339 proteins in 158 species: Archae - 0; Bacteria
- 5; Metazoa - 136; Fungi - 89; Plants - 55; Viruses - 0;
Other Eukaryotes - 54 (source: NCBI BLink)."
/db_xref="Araport:AT2G02570"
/db_xref="TAIR:AT2G02570"
intron_pos 27:0 (1/7)
intron_pos 50:0 (2/7)
intron_pos 92:0 (3/7)
intron_pos 119:2 (4/7)
intron_pos 145:0 (5/7)
intron_pos 204:0 (6/7)
intron_pos 247:0 (7/7)
BEGIN
1 MVGGVEELSI EQLASSISTY KEQLEQVRQL LSEDPRNSEY ADMEKELKEV IALTEEVLAT
61 AKQNEISLSD AGVSAEATPG SPDLEGAWEK TGLRNDPIHE GKFPVGTKVQ AVFSDDGEWY
121 DATIEAHTAN GYFVAYDEWG NKEEVDPDNV RPIEQNAIVE AERLAQATKN ALKRKIEKAA
181 SSDYQTKTLP AKLKIDPNDP EDVKIAKRKK IHAFKSKARF EQLEVVQNKK QNDWQQFQTT
241 KAKTKKVGFF TGRKKESIFK SPEDPFGKVG VTGSGKGLTD FQKREKHLHL KSGNAEGTDE
//