LOCUS AEC05585.1 1218 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana AAA-type ATPase family protein protein.
ACCESSION CP002685-282
PROTEIN_ID AEC05585.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="STI"
/locus_tag="AT2G02480"
/gene_synonym="DNA POLYMERASE III-LIKE PROTEIN"
/gene_synonym="GAMMA SUBUNIT"
/gene_synonym="STICHEL"
/gene_synonym="T8K22.22"
/gene_synonym="T8K22_22"
/inference="Similar to RNA sequence,
EST:INSD:ES139261.1,INSD:ES168127.1,INSD:AV548425.1,
INSD:EL195002.1,INSD:ES184830.1,INSD:EH981733.1,
INSD:BX838864.1,INSD:ES213528.1,INSD:AU229279.1,
INSD:EG456074.1,INSD:AU238141.1,INSD:BP599352.1,
INSD:EL994696.1,INSD:EH815322.1,INSD:ES207617.1,
INSD:EH859363.1,INSD:EG456076.1"
/inference="similar to RNA sequence, mRNA:INSD:AF264023.1"
/note="STICHEL (STI); FUNCTIONS IN: DNA binding,
DNA-directed DNA polymerase activity, ATP binding;
INVOLVED IN: trichome differentiation, trichome branching;
LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 11 growth stages; CONTAINS
InterPro DOMAIN/s: ATPase, AAA-type, core
(InterPro:IPR003959), DNA polymerase III, clamp loader
complex, gamma/delta/delta subunit, C-terminal
(InterPro:IPR008921), DNA polymerase III, subunit gamma/
tau (InterPro:IPR012763); BEST Arabidopsis thaliana
protein match is: AAA-type ATPase family protein
(TAIR:AT1G14460.1); Has 15360 Blast hits to 15082 proteins
in 2818 species: Archae - 391; Bacteria - 8894; Metazoa -
533; Fungi - 525; Plants - 301; Viruses - 38; Other
Eukaryotes - 4678 (source: NCBI BLink)."
/db_xref="Araport:AT2G02480"
/db_xref="TAIR:AT2G02480"
intron_pos 687:0 (1/5)
intron_pos 760:1 (2/5)
intron_pos 946:1 (3/5)
intron_pos 1153:2 (4/5)
intron_pos 1182:0 (5/5)
BEGIN
1 MSGSRVSDLS KLHLKKELTQ IRKAGRVLRD PGTTSSWKSP LDSSRSVALL ETPASRNGGS
61 SSQFPIRGES STNRRGKEKK VFLYNWKTQK SSSEKSGLAK NGKEEEEEEE DASSWTQASV
121 NDDDDVSDAR NGGDSYRREI QSASMGFRCR DTNLASQGVS KMRKSNVGSC KKKSKKKISS
181 SRLDCLSKYQ PRDDIVARNC NAGSDDTEEE LSNSEDLRKV TGASPLLLKL KQKNWSRSSS
241 RLLRANNRKE DSSCTYNSTP ALSTSSYNMY AVRNPSTVGS WDGTTTSVND GDDELDDNLD
301 LPGRQGCGIP CYWTKKAMKH RGGCRSCCSP SFSDTLRRTG SSILCGSQSV YRRHNRHSSG
361 GYSKQKIACR SAQGVLPLLS YGGDGRGGSS LGTGLSDDEL STNYGELDLE AQSRLDGRRW
421 STSYRSQDGL EAVALDGEEE EGSTPETIRS FSQKYRPMFF EELIGQSIVV QSLMNAVKRS
481 RIAPVYLFQG PRGTGKTSTA RIFSAALNCV ATEEMKPCGY CKECNDFMSG KSKDFWELDG
541 ANKKGADKVR YLLKNLPTIL PRNSSMYKVF VIDECHLLPS KTWLSFLKFL ENPLQKVVFI
601 FITTDLENVP RTIQSRCQKF LFDKLKDSDI VVRLKKIASD ENLDVDLHAL DLIAMNADGS
661 LRDAETMLEQ LSLLGKRITT ALVNELVGVV SDEKLLELLE LALSSDTAET VKRARELLDL
721 GADPIVLMSQ LASLIMDIIA GTYKVVDEKY SNAFFDGRNL TEADMEGLKH ALKLLSEAEK
781 QLRVSNDRST WFTATLLQLG SMPSPGTTHT GSSRRQSSRA TDDDPASVSR EVMAYKQRIG
841 GLHFSKSASP ASVIKRNGNH SHEAKPFSRV IDNNCYKSSS SSQMIESEGS IASHENSIAS
901 TMMLNQRSSE KLNDIWRKCI ERCHSKTLRQ LLYTHGKLIS ISEVEGILVA YIAFGENDIK
961 LRAERFLSSI TNSIEMVLRR SVEVRIILLP ETELLVVPHQ TRKPEMTNKS GHLNNIAGLN
1021 AETDVEVGSS VESRSKLPMQ RIESIIREQR LETAWLQTAD KDTPGSIIRV KPERNQILPQ
1081 EDTYRQTNVA SAISSSGLTT HQWVDELNNE VKLLKIGDNG ELQENLTGTR GQHCPLSPSL
1141 LHDTNFGNNK DNLGGYESGS GRVGCNILFC WNTKKTQRRS KSKQVKGTPV RSRRNRKSRF
1201 SLFNGCAKPR KAEGNIRR
//