LOCUS AEC05545.1 763 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana SNF2 domain-containing protein /
helicase domain-containing protein protein.
ACCESSION CP002685-217
PROTEIN_ID AEC05545.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="ETL1"
/locus_tag="AT2G02090"
/gene_synonym="CHA19"
/gene_synonym="CHR19"
/gene_synonym="CHROMATIN REMODELING 19"
/gene_synonym="F5O4.14"
/gene_synonym="F5O4_14"
/inference="Similar to RNA sequence,
EST:INSD:AV795772.1,INSD:CD530875.1,INSD:BG459530.1,
INSD:ES212201.1,INSD:EH864439.1,INSD:AV537063.1,
INSD:EL249856.1,INSD:EL033491.1,INSD:ES087891.1,
INSD:EH870140.1,INSD:EL213036.1,INSD:EG466619.1,
INSD:EL273947.1,INSD:ES194094.1,INSD:AV792695.1,
INSD:EL103822.1,INSD:AV795641.1,INSD:EG466617.1,
INSD:AV536344.1,INSD:ES145977.1,INSD:BP794813.1,
INSD:BP567385.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT002576.1,INSD:AY059857.1"
/note="ETL1; FUNCTIONS IN: helicase activity, DNA binding,
ATP binding, nucleic acid binding; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
DEAD-like helicase, N-terminal (InterPro:IPR014001),
DNA/RNA helicase, C-terminal (InterPro:IPR001650),
Helicase, superfamily 1/2, ATP-binding domain
(InterPro:IPR014021), SNF2-related (InterPro:IPR000330);
BEST Arabidopsis thaliana protein match is: chromatin
remodeling 5 (TAIR:AT2G13370.1); Has 19948 Blast hits to
16374 proteins in 2059 species: Archae - 127; Bacteria -
6550; Metazoa - 3755; Fungi - 4012; Plants - 1782; Viruses
- 219; Other Eukaryotes - 3503 (source: NCBI BLink)."
/db_xref="Araport:AT2G02090"
/db_xref="TAIR:AT2G02090"
intron_pos 196:0 (1/11)
intron_pos 235:1 (2/11)
intron_pos 249:0 (3/11)
intron_pos 332:2 (4/11)
intron_pos 393:0 (5/11)
intron_pos 455:0 (6/11)
intron_pos 513:0 (7/11)
intron_pos 566:0 (8/11)
intron_pos 592:0 (9/11)
intron_pos 637:2 (10/11)
intron_pos 710:2 (11/11)
BEGIN
1 MKRDFDEISE EEWSQHSFNA SRVLKRPRTP KKTRAATNPT PSIESFAFRR PSTAMTIESN
61 SSDGDCVEIE DLGDSDSDVK IVNGEDLLLE DEEEVEETKV VMRAARVGRR FVIEDEEASD
121 DDDDEAESSA SEDEFGGGGG GSGGRRGEDE DVVGKALQKC AKISADLRKE LYGTSSGVTD
181 RYSEVETSTV RIVTQNDIDD ACKAEDSDFQ PILKPYQLVG VNFLLLLYKK GIEGAILADE
241 MGLGKTIQAI TYLTLLSRLN NDPGPHLVVC PASVLENWER ELRKWCPSFT VLQYHGAARA
301 AYSRELNSLS KAGKPPPFNV LLVCYSLFER HSEQQKDDRK VLKRWRWSCV LMDEAHALKD
361 KNSYRWKNLM SVARNANQRL MLTGTPLQND LHELWSLLEF MLPDIFTTEN VDLKKLLNAE
421 DTELITRMKS ILGPFILRRL KSDVMQQLVP KIQRVEYVLM ERKQEDAYKE AIEEYRAASQ
481 ARLVKLSSKS LNSLAKALPK RQISNYFTQF RKIANHPLLI RRIYSDEDVI RIARKLHPIG
541 AFGFECSLDR VIEEVKGFND FRIHQLLFQY GVNDTKGTLS DKHVMLSAKC RTLAELLPSM
601 KKSGHRVLIF SQWTSMLDIL EWTLDVIGVT YRRLDGSTQV TDRQTIVDTF NNDKSIFACL
661 LSTRAGGQGL NLTGADTVII HDMDFNPQID RQAEDRCHRI GQTKPVTIFR LVTKSTVDEN
721 IYEIAKRKLV LDAAVLESGV HVDDNGDTPE KTMGEILASL LMG
//