LOCUS AEC05502.1 697 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/FYVE/PHD zinc finger superfamily
protein protein.
ACCESSION CP002685-157
PROTEIN_ID AEC05502.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G01810"
/gene_synonym="T8O11.2"
/gene_synonym="T8O11_2"
/inference="Similar to RNA sequence,
EST:INSD:EG436368.1,INSD:EG436503.1,INSD:EG436394.1,
INSD:EG436502.1,INSD:EG436499.1,INSD:EG436505.1,
INSD:EG436392.1,INSD:EG436393.1,INSD:EG436504.1,
INSD:EG436395.1,INSD:EG436389.1,INSD:EG436397.1,
INSD:EG436369.1,INSD:EG436391.1,INSD:EG436500.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY464577.1,INSD:AY464576.1"
/note="RING/FYVE/PHD zinc finger superfamily protein;
FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN:
regulation of transcription, DNA-dependent; LOCATED IN:
cellular_component unknown; EXPRESSED IN: sperm cell, male
gametophyte, flower, pollen tube; EXPRESSED DURING: M
germinated pollen stage, 4 anthesis, petal differentiation
and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc
finger, PHD-type, conserved site (InterPro:IPR019786),
Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger,
FYVE/PHD-type (InterPro:IPR011011), Zinc finger,
PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana
protein match is: RING/FYVE/PHD zinc finger superfamily
protein (TAIR:AT1G66170.1); Has 637 Blast hits to 622
proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa
- 159; Fungi - 216; Plants - 250; Viruses - 0; Other
Eukaryotes - 12 (source: NCBI BLink)."
/db_xref="Araport:AT2G01810"
/db_xref="TAIR:AT2G01810"
intron_pos 105:1 (1/2)
intron_pos 186:2 (2/2)
BEGIN
1 MAITAYDALT ERQKAPKVLL INDFAISSSS SSPPFFNLAA TFRDNIRSFL REYAEIEDYT
61 IDGATVSTIF LGSQANGVVF PLYIIEQQIS DSSPNPLCDF CRCFGWGHHY VTKRKYHMII
121 PNRDEWNEPL KRESLTLSSH LMHGLIHCNG FGHLLCINTD LDDPNHLSGD QIMDFWDRLC
181 STLHTRKISL DDTSKKGAMD LRLLHGVAYG RPWFGKWDYM FSHGSFGVKK DLYWRAILTL
241 SSIEVDKILE ELSGTSKGRV MKKIIDFYRG STESPLATLS DLLRFMLGFI SKAPIERKTA
301 MALVAMSLDH VSYPTLRADE NSEVCTSPDQ ESDDNGYESG RDTVLDDHNT TTSGIKPPQY
361 YSFDDLSRRE HSRWPGRRLN DAAQAVLKVF KERNSTISRQ DLREAVRSSI GDTGLIDFLL
421 KHIDKVLIGD QIVQRSTNPK SRMLQFSLRT INSRVQEQKR KKKRKVKPQE TSECTSTTPG
481 LSPYDDILYL YQNLLLTYPD SDLYSEASQV ILKCKSFVKE WSYQEQNHLT VSCQVLPNHE
541 ELLRDFTRLL PPGDLVAVPE NATIRELKSA AEKVLRDTYC ITETFEVLEI RNRYLEKLDD
601 NVSLKSQGNT EFMVKGFGLD IGTELRYEGG FDDWTVDCKC GARDDDGERM VACDACKVWH
661 HTLCNSIEDD EAVPSVFLCN MCYGDSLRSK KRNLSIR
//