LOCUS ABE41616.1 397 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 putative branched chain
amino acid periplasmic binding protein of ABC transporter
protein.
ACCESSION CP000283-4376
PROTEIN_ID ABE41616.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_4400"
/transl_table=11
BEGIN
1 MNIKLLSAAL ASSALLAVTP ASAQGVKIGI LNDQSGVYAD YGGKWSLEAA KMAIEDFGGE
61 VLGQKVELVS ADHQNKPDTA ISIARKWYDV EGVDMITELT TSSVALAIQD LSREKKKIDI
121 VVGAATSRIT GDACQPYGFH WAFDTHALAV GTGGALVKSG GDTWFFLTAD YAFGYALEKD
181 TGEIVQASGG KVLGAVRHPL NSSDFSSFLL QAQSSKAKVV GLANAGLDTA NSIKQAAEFG
241 VVAGGQKLAG LLMTLAEVHG LGLKAAQGLV LTEAYYWDRD DKSREFADRF FKRTNRMPNM
301 IQAGTYSATL SYLKAVKAAG TKDTEAVTKK LKELPVDDAF AKGKVLANGR FVHDLYLFEV
361 KAPAESKKPW DYYKLISTVE GDKAFPTAAE SGCPLTK
//