LOCUS ABE41346.1 550 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 chaperonin GroEL protein.
ACCESSION CP000283-4106
PROTEIN_ID ABE41346.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_4127"
/transl_table=11
/db_xref="InterPro:IPR001844"
/db_xref="InterPro:IPR002423"
/db_xref="InterPro:IPR012723"
BEGIN
1 MAAKDVKFAG DARDRMLRGV DILANAVKVT LGPKGRNVLI EKSFGAPRIT KDGVTVAKEI
61 ELEDKFENMG AQMLREVASK TNDLAGDGTT TATVLAQAIV REGAKSVAAG MNPMDLRRGI
121 EIAVAAVIKD IGKRAKPVAS SAEIAQVGTI SANGDAPIGK MIAQAMQKVG NEGVITVEEN
181 KSLDTEVDIV EGMKFDRGYL SPYFVTNAEK MTVELDDVYI LLHEKKVSGL QSMLPVLEAV
241 VQSGKPLLII AEDVEGEALA TLVVNRLRGG LKVSAVKAPG FGDRRKAMLE DIAILTGGQL
301 ISEELGVKLE SVTLKMLGRA KKVVIDKENT TIVNGAGKKA DIEARVQQIK AQIEETSSDY
361 DREKLQERLA KLAGGVAVIR VGGATEVEVK EKKDRVEDAL NATRAAVQEG IVPGGGVALL
421 RAKKAVGRIN NDNADVQAGI NIVLKALEAP IRQIAENAGV EGSIVVGKIL ENKSETFGFD
481 AQTEEYVDML AKGIVDPAKV VRTALQDAAS VAALLVTTEA MVAELPREAA PAMPGGGGMG
541 GMGGMGGMGF
//