LOCUS ABE40938.1 713 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 oligopeptidase B. Serine
peptidase. MEROPS family S09A protein.
ACCESSION CP000283-3698
PROTEIN_ID ABE40938.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_3717"
/EC_number="3.4.21.83"
/transl_table=11
/db_xref="InterPro:IPR000379"
/db_xref="InterPro:IPR001375"
/db_xref="InterPro:IPR002470"
/db_xref="InterPro:IPR004106"
/db_xref="InterPro:IPR008162"
BEGIN
1 MQRDLSMTQS PPRDALTPPA APRRPHAFTT HGITLNDDYA WLKDPNWQDV LRDPSLLDPD
61 IRSYLEAENS YTDGLLGHTG ALQKKLVAEM RGRIKEDDSS VPLPDGPYAY LRKYREGGQH
121 PLYGRTPRDG DEVDVILDGD ELAKGTEYFQ FGGRRHSLDH KLEAWSADTA GSEYYTIRVR
181 DWATKQDLPD VVEETDGGVV WTLDSRAFFY VKLDDNHRPM QVWKHTLGTA QADDVLVFQE
241 QDAGWFTHIH ESSSGRFCVI AGGDHETSEQ RLIDLAAPDA EPRLVAAREP GVQYSLADRG
301 DELFILTNAD DAIDFKIVTA PLAAPTRDNW RNLIPHREGI YIIDFDLFAG HMMRLERANA
361 LPSVTIRDLA TGSEHAIAFD EAAYSLSASG GYEFDTTNMR FSYSSMTTPS EVYDYDMATR
421 ARVLRKRQEI PSGHNPADYV TTRIMAKADD GAEVPVSLLH RKGLKLDGTA PLLLYGYGSY
481 GHAMPAGFSA NALSLVDRGF VYAIAHIRGG ADKGWGWYLD GKRDKKTNSF DDFAACARAL
541 IAARYTSAKR IVAHGGSAGG MLMGAVANRA GELFAGIVAE VPFVDVLNTM LDDTLPLTPP
601 EWPEWGNPIK SEADFKTILS YSPYDNVAAK DYPAILAMGG LTDPRVTYWE PAKWVARLRA
661 SMTGGGPVAL RINMGAGHGG ASGRFSRLDE VAIVYAFALW AVGLADAPRE NVA
//