LOCUS ABE40925.1 592 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 ferredoxin protein.
ACCESSION CP000283-3685
PROTEIN_ID ABE40925.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_3704"
/transl_table=11
/db_xref="InterPro:IPR001041"
/db_xref="InterPro:IPR001054"
BEGIN
1 MPSKRTTTDR TRDADEQRPR HLAFLRGIGL RQVRMFTGLV LFAYLLSHFL NHALGNISPE
61 ALQAGVEWHL EIWQFLPVAI LFYGSVATHA GLGLWALYQR RRFRWRTIEP LQLLLGLSVP
121 LLIYGHVIGL RLSNALYDID KLYPQVFYAY WVAAPPYRVW LMVLVMLVAW THGCIGLYVW
181 LRIKPMARKA MPWLLAVAVL VPTLALLGFY QGGRETIRDS SSRGWQEKNL SVKQLGTLAQ
241 QATLDRVGEA FVIGYLGLIG LALIARAARG LNERRGGMIR LTYGADRMIR VPKGLSVLEA
301 SLRHNIPHAS ICGGRARCST CRIRVIGNPA DLPPPSSREA FVLDSVGAGD DPTIRLACQL
361 RPTHDLAFMP VFPPRNAAAA RLAARAARVG EERYLVSMFV DLRGSTKIAE TRLPFDTVFI
421 VNRFLGAVSR AVIASGGQPN QFIGDGVLAL FGLDDTPREA CRNAIRAAAA IAASVDELNG
481 FIGHDLPEPI RFGIGLHGGE VILGEIGYRD HMVFTALGDS VNVAARLQDM TKALGCETLL
541 SDEVRETAGV AADQLPTQQV EIRGRVEPML VCPIVQSRDL AAALDQSELM FA
//