LOCUS ABE40853.1 1173 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 DEAD/DEAH box helicase-
like protein.
ACCESSION CP000283-3613
PROTEIN_ID ABE40853.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_3630"
/transl_table=11
/db_xref="InterPro:IPR001410"
/db_xref="InterPro:IPR001650"
/db_xref="InterPro:IPR006935"
/db_xref="InterPro:IPR011545"
BEGIN
1 MPTTPETIAA DIEEAATAGF RGNLLARGQA RAIIWRDGAL PAEAPAFAPQ LSYDLHSYAY
61 ALLGLALRLR EIGGDAARAR IAFEQAATAL EAVISKGDRQ EVDRDFHFVM AAASYHLAHL
121 SARAYSLLAT VDADENFSRI ERALAQLMRR NFEALRAGVL DYRASATGSD ARIAAEFQAR
181 LDQPEGAGDP EARGEFIFEG LDVALTDAFL SAISMFVLAL DRGDRSLVDQ ALARLRENLS
241 ICSELNLLPQ WWAHRLAIHL LSDLWSNTFH ERVPRQPTGG EAADWPRLRQ LFIALLQRRP
301 KAEIDLWPSQ LEAAERAVDQ GDDLVVSLPT SAGKTRIAEL CILRCLAGGK RVVFVTPLRA
361 LSAQTETTLQ RTFGPLGKTI SALYGSIGVS GFDEDAIRER DIVVSTPEKL DFALRNDPSL
421 LDDVGLLVFD EGHMIGPNER EIRYEVQIQR LLRRRDAHAR RIVCLSAILP DGDQLDDFAA
481 WLRRDHPGGL IKNDWRPTRL RFGEVIWTPA SASARLNLRV GDERPWVQRF LTGAAPPLFI
541 PPKRLRTKVF PGNQRELCLA TAWRLVEDGQ TVLIFCPERR GVEPFADVVV DLHERGALRS
601 LLEVDPGVLS TAITLGEEWL GHDSAILKCL RLGVALHHGA LPTAYRKEVE QLLRANVLKV
661 TVSSPTLAQG LNLSATAVVM FSLHRAGELI EISEFKNVIG RAGRAYVDVE GIVLFPMFDE
721 IVKKRRSWEA LITDLGAREM ESGLVRLVSA LLLRMRARVG GDLNQLIEYV VNSAAAWVFP
781 EVQNETPKDR ERALADWNRH VATLDTAILS LIGENEIADH EVEAALDHIL QSSLWHRRLL
841 RQNDQVRHLL KAGLLSRSRL IWSQSTSTRR RGYFLAGVGL TTGQALDAIA ADANLLLLQA
901 NAGIGAGDAG AAIDAVTRLA ELVFTFYPFT PDPWPGNWRD ILRSWLLGQP LGALAAGQAS
961 DTLQFIEGSL VYRLPWAMEA VRVRAAANGD TVGLFGLTLE DHELSLAVLS VETGTMNRSA
1021 SILIQAGFTS RLAAIKAVTD SGATFQNGGQ LRAWLSSEAL AAWNALPDWP TAETKAMWTE
1081 FTQGFTPRAS NIWSDRRYWA SATWYGVPPL PGVPVQLHDW NGQRLVLSAD CTPLGTLRNA
1141 LNANRKGLIQ ATVSPTAGRI DLVYIGPDDL SAT
//