LOCUS ABE40840.1 671 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 Autotransporter beta-
domain protein.
ACCESSION CP000283-3600
PROTEIN_ID ABE40840.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_3617"
/transl_table=11
/db_xref="InterPro:IPR005546"
BEGIN
1 MQRMTLAPSR RIAMLWSAAL ALSASASPAL AQQAITTPIL ATDQNFRDLA GISENAGGSG
61 FVDPTTHGGA MRTGVFYRSE ALTTLSTTDW RTLSSLRIGL DVDLRTPSEI DGPTSITAPN
121 AGHDWLPAGA RYINVNIYGT DAPPSSASVA TPGEASAYLI ATYQNFVSDA TQRGGFRSAL
181 LALANEPSAA LFHCAAGKDR TGWTSMLLQS IAGVAPETIL TAYLASNIYM AESISAALAQ
241 IRAAVGNGPA GDLAVATAAT MLGVQESYLH AGLAQIVAQY GSMQAYLIQG LGLTQADIYV
301 LRAKMVYFAN LPGQDGMTGN AASGATLLNA LQNSPLSGRY TAFNYYLQSA VDAGTLGGVE
361 SLVGGQLHAD TVAFLARQPL WIDAALAPNA SGRDLGVGET KAWLAGVGGY FSSDGGSGVS
421 RSIERSGGPL AGVTWRIDAQ SSAFVGVGYN AGSVSSAGGR ADLDTMLATF GGRYGLSSLD
481 AGPFAEARAS VGWFTYHSSR ILGGGLGGTS GDASGGVVSG RADIGSVIRA AQWTFTPQLG
541 LRATRVGLGR IEERGSELAL AVDRIGYTAT SAIAGLDVAL DPRQVYGWQI APSLSLGYER
601 ALSNPSVETT AALYGYTVSQ VSAYDSRNLV RAGFAIAARQ DAATFKAGIN AIRGDNASAG
661 FDARVSIGYQ F
//