LOCUS ABE40808.1 1128 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 transglutaminase-like protein.
ACCESSION CP000283-3568
PROTEIN_ID ABE40808.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_3585"
/transl_table=11
/db_xref="InterPro:IPR002931"
BEGIN
1 MLALDCVLPR CSAQKECWSC PVSIFVALHH VTHYKYDRPV DIGPQTIRLR PAPHTRTPIL
61 SYSLKVTPAN HFINWQQDPQ GNWLARFVFP EKANELKIEV DFTAAMTVIN PFDFFVESYA
121 ETFPFAYSND LMVELAPYLA TTEPGPLLRD YLASIPREAD STVNFLVDLN AKLRERIRYI
181 IRMEPGVQTP EETLAAGAGS CRDSAWLLIQ TLRHIGLAAR FVSGYLVQLR PDIDPVEGPR
241 EVENDFTDLH AWCEVYLPGA GWIGFDVTSG MLAGEGHIPV AATPHYRTAA PISGVVGFAN
301 VDFNFEMSVK RIHEAPRITR PFSDESWARL DALGDKVDAD LAAADVRLTM GGEPTFVSID
361 DMESPEWNVA AVGGAKRMLA DDLIRRLRTR FAPGGLLHFG QGKWYPGESL PRWAFGLYWR
421 KDGVPIWKNA DLIAPVVGQR PAKVEEAEQF AIGTAKRLGI DTDYVLPAFE DPNHWLQKEA
481 GLPPNVDPSD SKLADPEERA RMARVFDSGL TTPKGFVLPI QAWNAEVPKQ HKRWRSERWK
541 LRRGNLFLMP GDSPMGLRLP IASLPHIPEE DYPFIVERDP LDPRGALPAF TPPPAAEPMP
601 VYEQTPAPSG AANQAVAEQK LRSGGVRTAM SIEIREGVLC AFMPPTETIE DYLELVSAVE
661 ATAEEMQLQV HVEGYPPPFD PRIEVIKVTP DPGVIEVNIH PARNWREAVT TTFGLYEEAA
721 QVRLGANRFL IDGRHTGTGG GNHVVIGGAK PADSPFLRRP DLLKSLVLFW QRHPALSYLF
781 SGMFIGPTSQ APRIDEARHD SLYELEIALA HVPPPGVKGP LWLVDRLFRH ILVDITGNTH
841 RAELCIDKLY SPDSPTGRLG LVEFRALEMP PDPRMSLAQQ LLIRALTAKL WREPLDGKFV
901 RWGTTLHDRF MLPHFLWEDF RDVLAELGRA GYAFEPEWFS AQLEFRFPVF GSVYHGGVTL
961 ELRQALEPWH VLGEEGSAGG TVRYVDSSVE RLQVKAEGFV EGRHVITCNG RRLPMTPTAR
1021 SGEAVAAVRF KAWQPASGLH PTIPVHSPLV FDIVDSWNGR SLGGCVYHVA HPGGRSYETK
1081 PVNSYEAEAR RLARFQDHGH TPGRIDPPPE ERTLEFPLTL DLRTPLLH
//