LOCUS ABE40775.1 550 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 AMP-dependent synthetase
and ligase protein.
ACCESSION CP000283-3535
PROTEIN_ID ABE40775.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_3552"
/transl_table=11
/db_xref="InterPro:IPR000873"
BEGIN
1 MTHPGEQFYP EGVRWDAPIA KGTLPDLLAE AAQQFGPRPA LEFRDRQISY TKLHDLAGTA
61 AAALLRAGYG AGSSVALFLG NTPDHPINFF GALKAGARIV HLSPLDGERA LSHKLTDSGA
121 RVLITTDSAA LLPMALKFLD KGLLDRLIVC ADDDWGAVGN PHAALPVDPR VVRYADFVRD
181 AQQPASWPEV SPDDIALLQY TGGTTGLPKG AMLTHANLTS AVSIYDVWTL VRGEGVQRVI
241 CVLPLFHIYA LTVILLRCLK MGDLISLHQR FEVAAVFRDI EEKRATAFPG VPTMWIALAN
301 DPSLESRDLS SLTMAGSGGA PLPVEVARLF ERKTKLKLKS GWGMTETCSP GTGHPPEGPD
361 KPGSIGLMLP GIEIDVVALE DSKKVLPPGA VGELRIRGPN VTKGYWNRPQ ETAESFVGDR
421 FLTGDIGYMD PDGYFFLVDR KKDMIISGGF NVYPQMIEQA IYEHPAVQEV IVIGIPDAYR
481 GEAAKAFITL RAGAAPFTVE ELRDALAGKL GKHEYPAAVE FVAELPRTPV GKLSRHELRN
541 QLSKSTNQSQ
//