LOCUS ABE40706.1 1100 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 Trehalose synthase-like protein.
ACCESSION CP000283-3466
PROTEIN_ID ABE40706.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_3483"
/transl_table=11
/db_xref="InterPro:IPR006047"
/db_xref="InterPro:IPR006589"
/db_xref="InterPro:IPR012810"
/db_xref="InterPro:IPR012811"
BEGIN
1 MNLMSTIDAT NSKPELEATD ELWYKDAIIY QLHVKAFADS NNDGIGDFAG LTEKLDYLQD
61 LGVTALWLLP FYPSPQRDDG YDIGDYGSIN PDFGTMKDFR RFIVEAKKRN LRVITELVIN
121 HTSDQHDWFK RARRSEKGSS ARNWYVWSDT DQKYQGTRII FTDTEKSNWT WDPEAGQYYW
181 HRFFSHQPDL NFDNPHVVSA LVKVMKRWLD TGVDGFRLDA IPYLCERDGT NNENLPETHA
241 VIKQLRAELD AYAKGKVLLA EANQWPEDVQ EYFGHSDECH MAYHFPLMPR IYMAIAQEDR
301 FPITDIMRQT PEIPANCQWA MFLRNHDELT LEMVTDVERD YLWKTYAADP RARINVGIRR
361 RLAPLMDNDR RKIELMNSLL LSFPGTPIIY YGDEIGMGDN IYLGDRNGVR TPMQWSSDRN
421 GGFSRADPAR LYAPTIMDPV YGYASVNVEA QARSLSSLLS ATKRLISVRK STFAFGRGTM
481 TFIRPANRSV LAYVRQYEDE VILCVANLSR SAQATELDLS PWKDRVPQEM LGRTRFPAIG
541 ELPYMITLAP YGFYWFKLEE RDTSQHVAPA AAVPEFETLV VPVGATWMSL ARTRGVFERD
601 VLPAHLSRTR WFPERSPRSI HPRVTSAIPF SNTHENRPWL AFFEATVRGV DARYVLPMQI
661 DWVRFDRERY NPHAFAAVRQ GAREGTLLDV ATDVEFVTLL LDNLRESVVV ENEGVRLQFR
721 PGSRLAEKPA VAYHDIRAVE TEQSNSTALV GEHYVIKLYR RLQSGINPEI EMGRFLTEVA
781 GYTNTPSLLG SVELVEGDKV SAIAVVHDFV ANQGDGWIVT SGYLDRYVDD QRLLINSEEQ
841 HVSEELAPYR HYMQQTGKRV AEMHIALSSH PEQPDFAPAP ISSDDAERWT GIVTENAKRV
901 LDELQHKRES LKDAERAIVD ELLAQRDGIF ERLRGLFGSD GGLNIRHHGD FHLGQMLIVK
961 DDVFIIDFEG EPRRSQAERR AKAPAARDVA GLVRSIDYST TAALERALKV STDETGKIAA
1021 ALDGWRIRST EAFLTAYRET MGDSLVWPAD RAAADRLLDF FLIEKALYEI EYELAHRPDW
1081 LRVPLAGILR ILTRQPEEIS
//