LOCUS ABE40697.1 950 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 glucose-6-phosphate isomerase
/ transaldolase protein.
ACCESSION CP000283-3457
PROTEIN_ID ABE40697.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_3474"
/EC_number="5.3.1.9"
/EC_number="2.2.1.2"
/transl_table=11
/db_xref="InterPro:IPR001585"
/db_xref="InterPro:IPR001672"
/db_xref="InterPro:IPR004732"
BEGIN
1 MNPVKALEQH GQAVWLDFLA RGFIAKGDLK KLIDGDGVKG VTSNPSIFEK AIGSSDEYDG
61 AIGAALKQGD RSVGELYEAV AVEDIQHAAD VLRPTYDKLE GRDGFVSLEV SPYLALDTKA
121 TIVEAERLWG AVKRENLMVK VPATRQGLPA IKHLISKGIS VNITLLFSQK VYVEVAEAYL
181 SGLEALIASG GDPSHVASVA SFFVSRIDSA VDKELDDKIA KANDPAEKAR LEKLKGKIAI
241 ANAKLAYQDY KRLFSGDRWK KLEICGAKPQ RLLWASTGTK NKAYSDVLYI EELIGPDTVN
301 TVPPSTLDAF RDHGKARASL EENVDDARAA LKDLDGVGIS LDKITDRLVT EGVQLFADAF
361 DKLLGAVASK RETVLAGGVN TQKLALAADL ANSVKEHGEE WRNTGKIRKL WDQDKSVWTG
421 ADEDKWLGWL NSAAAEKAKL ADYAEFAKWV KARGFTDAVV LGMGGSSLGP EVLAKTFAQQ
481 PGFPKLHVLD STDPAQVRSL ESSVTLATTL FIVSSKSGGT TEPNAMKDYF VARVGENVGV
541 DKAGQHFVAV TDPGSSMEKV ATAAKFARIF HGNPTIGGRY SVLSPFGMAP AAAAGLDLGK
601 FLDLTLAMVR SCGPDVPPQE NPGVQLGLAM GCAGLQGRDK VTITSSRAIA DFGAWAEQLI
661 AESTGKDGKG LIPIDGEPLA EPSTYGNDRL FIDLRIESES DAAHDGKLAA LEQAGHPVVR
721 IVLKSPDAIG QEFFRFEFAT AVAGAILGIN PFNQPDVESA KIKTRELTAA FETSGALPAE
781 KPALATAQAD LYTDESNAAA LRKAGADGTL GSWIKAHLSR SQAGDYVALL AYIERNAAHI
841 DALQTMRLAV RDARHLATCA EFGPRFLHST GQAYKGGPDS GVFLQITADD AEDLPVPGQT
901 ASFGVIKAAQ ARGDFDVLTE RGRRALRVHI KGDLGAGLKA LDAAIRDALN
//