LOCUS ABE40629.1 528 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 Drug resistance transporter
EmrB/QacA subfamily protein.
ACCESSION CP000283-3389
PROTEIN_ID ABE40629.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_3405"
/transl_table=11
/db_xref="InterPro:IPR004638"
/db_xref="InterPro:IPR007114"
/db_xref="InterPro:IPR011701"
BEGIN
1 MSASTTATGA ATPEAPSEHV PVSRLVAFLI MVFGMFMSIL DIQIVSASLS EIQAGLSASS
61 SEVSWVQTSY LIAEVIAIPL SGFLSRALGT RNLFAISAAG FTFASLMCGF TSTITEMIVW
121 RAIQGFLGAG MIPTVFASAY TVFPRSKFNL VGPIIGLVAT LAPTIGPTVG GYITDLMSWH
181 WLFFINIVPG IGITIGVLAL VDFDEPHYEL LDHFDWWGLG FMAGFLGSLE YVLEEGPRND
241 WFNDESILIF AIVCVVSAVA FFWRVLTARE PIVDIRAFTN RNFAFGCMFS FCVGIGLYGL
301 TYIYPRYLAE VRGYSALMIG ETMFVSGIAM FLTAPLVGRL MALIDMRILI AIGLLLFAGG
361 TWQMTWITRD YDFYELLWPQ IFRGVGMMMA MVPVNTISLG TLPAARVKNA SGLFNLTRNL
421 GGALGLALIN TALDGRTDFH ISRLHDKVTW GNAQAVDFLN MLTQRFQGLG DASMMALKQF
481 NQIVHRQAVT MSFGDTFFML TFFYVGLSTL VFLLAKPANP MVAAEGGH
//