LOCUS ABE40617.1 467 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 UDP-N-acetylmuramate-
-L-alanine ligase protein.
ACCESSION CP000283-3377
PROTEIN_ID ABE40617.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_3393"
/EC_number="6.3.2.8"
/transl_table=11
/db_xref="InterPro:IPR000713"
/db_xref="InterPro:IPR004101"
/db_xref="InterPro:IPR005758"
/db_xref="InterPro:IPR013221"
BEGIN
1 MRLPREIGPI HFVGIGGIGM SGIAEVLCNL GYTVQGSDAS ESANVNRLRE KGIAISVGHK
61 ADNIAGADVL VVSTAIKRDN PELLAARAQR IPVVRRAEML AELMRLKSCI AIAGTHGKTT
121 TTSMVAALLD AGDVDPTVIN GGIINAYGTN ARLGAGDWMV VEADESDGTF LKLPADVAVV
181 TNVDPEHLDH FKTFDAVQDA FRIFVENVPF YGFAVMCIDH PVVQALVGKI EDRRIITYGE
241 NPQADARLLD LKPSGAGSTF KVAFRDRKAG TAHEITDLML PMPGPHNALN AVAAIAVAHE
301 LGLSDDTIRK ALAAFGGVRR RFTKTGEWNG VTIIDDYGHH PVEIAAVLKA ARQSTSAKVI
361 AVVQPHRFTR LQSLFEEFCT CFNDADTVIV ADVYPAGEAP IAGIDRDHFV LGLRAHGHRE
421 VIPLQDSASL AGVVAGVARS GDYVVCLGAG NITQWAYALP GELKALG
//