LOCUS ABE40342.1 1172 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 pyruvate ferredoxin/flavodoxin
oxidoreductase protein.
ACCESSION CP000283-3102
PROTEIN_ID ABE40342.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_3116"
/transl_table=11
/db_xref="InterPro:IPR002869"
BEGIN
1 MVARSNAYEG RMGIDQGPIS LDQKYTQHSG HIFLTGIQAL VRLPMAQVRR DRAAGLNTAG
61 FVTGYRGSPL GGYDQQLVAA RRHLEQYNVK FQPGVNEDLA ATAIWGSQQL NLSPGAQYDG
121 VTGIWYGKGP GVDRCGDVFR HGNAAGSAKN GGVLCLAGDD HGAKSSTVPH QSDHAFIAAL
181 MPYLYPSSIH EIIEMGLLGI AMSRYSGCWV GMKVITETVE TTAEINLADE MTPFVLPTDF
241 EMPPGGLNLR WPDDRYDQDR RLQDYKGFAA IAFARANKVN RITMDSPNAR FGIMASGKSY
301 EDVRQALREL GIDEQVAARI GLRLYKIGMP WPLEPEGVRN FAHGLEEIFV VEERREIVEN
361 QLKQQLFSTR DRPRVIGKMD EHEHRFLPFA QELSVAKVAT SLVDRLLAME IDPTIAEMLR
421 AKADWFHGRD ASQVQNVVPI ARTPYFCSGC PHNTSTKVPE GSRALGGIGC HFMSLWMDRN
481 TETFTHMGGE GVPWVGIAPF TDEKHIFANL GDGTYFHSGS LAIRQSVASK ANITYKILYN
541 DAVAMTGGQR HDGDLSPQQI TYQLHAEGIR AIYLVSETPG AYPADSIAPG THLRHRDELD
601 SVMKECRQIE GASAIVFVQT CAAEKRRRRK RGTLEDPPRR VVINAAVCEG CGDCSVQSNC
661 ISVEPLETEL GRKRTINQST CNKDYSCLKG FCPSFVTIDG GKLRKRAPVD LGGFSDLPEP
721 LSRPGLDKPY NIAIGGVGGT GVLTIGALLG MAAHIEGKAS MILDMSGLAQ KGGAVLSHVR
781 LSEKPEEVTC SRIVTGTADV LIVADEVMAI SKETISLCEP ARTHGVVNTH LIPIADFIRN
841 RDFDFQTRKV NSVLKSALRK DSAFLDFTKA AETLLGDSIA TNMMMMGYAY QQGLLPVKAA
901 SIEQAIELNG VSIKMNTQAF QLGRLAAADP ARLASLLAGA DATVAPKTQG EMSLDEIIAH
961 RGTMLTDYQG NRLATRYREL VAKVRAAAEA GGYGDELPRA VAINYAKLLA YKDEYEVARL
1021 LTQPAFEQQI RDQFDGDYKV SFNLAPPILP GVDVTGRPKK RQFGEGMRPV FRMLSKLSFL
1081 RGTPLDLFGY HPERKLEREL IANYEADVAS VVSYLSPSTL DTAVELLSLP DRIRGYGPIK
1141 QKSVDDTAPR FAELRANLRD PRPAPPRQMA AE
//