LOCUS ABE40336.1 726 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 Pyrrolo-quinoline quinone protein.
ACCESSION CP000283-3096
PROTEIN_ID ABE40336.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_3110"
/transl_table=11
/db_xref="InterPro:IPR001479"
/db_xref="InterPro:IPR002372"
/db_xref="InterPro:IPR009056"
BEGIN
1 MKQPAEPVWF AHRFLRDSKQ KRSASRDLSA GVAAAVVAVL LHGSAVAQGA KGSAEHIRAV
61 TGAIDSAAIV ANAKTTNDWP SYGLDYAETR FSKLDQINAD NVKSLGLQWS YSLGSDRGVE
121 ATPVVVDGIM YVTASWSVVH AVDTRTGKKL WTYDPGVDRS KGYRGCCDVV NRGVALYKGK
181 VFVGAYDGRL VALDAATGAK VWEKDTLIDH EHSYTITGAP RVFNGKVVIG NGGAEYGVRG
241 YVTAYDAETG NQAWRWFTVP GDPSKPFEDA SMEAAAKTWD PAGKWWINGG GGTAWDTITF
301 DPDLNMVYIG TGNGSPWNRS LRSPAGGDNL YLGSIVALNA DTGKYVWHYQ ETPGDNWDYT
361 STQPMILADL TIDGQPRKVV LHAPKNGFFF VIDRTNGKFI SAKNFVDVNW ATGYDAGGRP
421 IEAPEARSPD KSFDSIPGPY GAHNWHPMSF NPQTGLVYLP AQGVPINLTG EKALTQNKME
481 PFKFGSTTGW NVGFALNATP PKNLPFGRLL AWDPVQQKEV WRAEYVAPWN GGTLTTAGNL
541 VFQGTADGRF VAYNAKTGEK LWQSPLGTGA VAAPATYMVD GVQYVSIAVG WGGVFGISQR
601 ATETEAPGTV YTFAVGGKAP MPEFAKYQMG NLLTGIEYDP KDVLEGTAIY VAACATCHGV
661 PGVDRGGNVK NLGYSTTEKI GHLKDIVFKG PFRDKGMPDF TGKLTEADVV KIQAFIQGTA
721 DAIRPK
//