LOCUS ABE40319.1 691 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 Carbamoyl-phosphate synthase
L chain, ATP-binding protein.
ACCESSION CP000283-3079
PROTEIN_ID ABE40319.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_3093"
/transl_table=11
/db_xref="InterPro:IPR000089"
/db_xref="InterPro:IPR001882"
/db_xref="InterPro:IPR003135"
/db_xref="InterPro:IPR005479"
/db_xref="InterPro:IPR005481"
/db_xref="InterPro:IPR005482"
/db_xref="InterPro:IPR011761"
/db_xref="InterPro:IPR011764"
BEGIN
1 MPIAVPAGRA EPPQGRKNKN MFKRILIANR GEIACRVIKT ARLMGIETVA VYSEADRDAL
61 HVEMADEAVL IGPAAASESY LVIEKIIEAC KKTGAEAVHP GYGFLSEREA FARALADAGI
121 VFIGPNPGAI AAMGDKIESK KAAAKAKVST VPGFLGVIED EKHAVKIADE IGYPVMIKAS
181 AGGGGKGMRI AHSTAEVAEG FGLAKAEAKA SFGDDRVFIE KFIVDPRHIE IQVLGDKHGN
241 VIYLGERECS IQRRNQKVIE EAPSPLLDEG TRRKMGEQAV ALAKAVNYDS AGTVEFVAGQ
301 DKSFYFLEMN TRLQVEHPVT EMVTGIDLVE QMIRVAAGEK LALAQKDVTL KGWAVESRVY
361 AEDPFRNFLP SIGRLVKYRP PAESSVSGVT VRNDTGVQEG GEISIFYDPM IAKLVTHAPS
421 RAAAIEAQAH ALDAFYVDGI RHNIPFLSAL MTHPRWREGN LSTGFIAEEF PQGFAARLPE
481 GDVARRIAAV GAAIDRVIGE RKRKISGQMI GRAVIRERRR SVWLERSEIP LDVIREGDGF
541 VVRFVEAEGS LGQPHQLLSS WLPGDPVWQG TIDGHPLAVQ VRSVPNGFRL AHHGYEVAVN
601 VFTEREASAA RWMLEGNKAD TGKKVLCPMP GLVISIAVVE GQEVKAGETL AVVEAMKMQN
661 VLRAERDGQV KKIHAAPGAT LAVDALILEF A
//