LOCUS ABE40280.1 644 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 4-amino-4-deoxy-L-arabinose
transferase and related glycosyltransferases of PMT family-
like protein.
ACCESSION CP000283-3040
PROTEIN_ID ABE40280.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_3054"
/transl_table=11
BEGIN
1 MTAPPICRGR RTIKRKQPKN RRPKKKHQGG RSQAGSVASS AATPASSDAA APAAPGDTAV
61 APAPAAAAPP PAAANKAERA PVRPAPVGHK RSAPPPKPAQ YKSAPRQPAA LPTPNSPAAK
121 PVAAAPPGLL LSACDTVLQI LRNEPRRLLL WILGIYGGLW FAAAISFPSL PAVSYEMALF
181 GKELEAGYWK YPPLAPWLTE IAALLTGRWD GSQLVLSIGS ALAALVLVWR LGAGIVGHSG
241 ATLAVALTIL IGCFGPQVTA FDPAIASLPL VVAAVALYRK AVLGQARWSW VGLGIVCALL
301 ANANHAGFAL MLVLIGHLLL TREGRRHLLT AGPAIAALAC FVVLLPHLMW LAQMNAAGTL
361 TPVVHASDLL SRIATAFAFV FGQAGLHLGL ILVAVLAMLP RVPLQGEPAV LQLEAPTGFD
421 RSLILAAAFV PSLLVAAGSV VGWFTIGAYT GSALVALSGL ALVLLLPPQI VLRAPRLAVV
481 VWLLVLIGVP FGATASIYSK AYGSGPLPTE LYPARALSNA MQAVWKSRTT RPLDIVTGST
541 RQAGFVALTA SPRPSVFIDA DFAKSPWITP DRLKQSGTLV VWSTDEFART DEIPAPYRSA
601 LGAAAPLFGT MVLPLGRGKL KAYGWAMIAP DGVQLPAAAP PAPK
//