LOCUS ABE40192.1 388 aa PRT BCT 28-JAN-2014
DEFINITION Rhodopseudomonas palustris BisB5 permease YjgP/YjgQ protein.
ACCESSION CP000283-2952
PROTEIN_ID ABE40192.1
SOURCE Rhodopseudomonas palustris BisB5
ORGANISM Rhodopseudomonas palustris BisB5
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
Nitrobacteraceae; Rhodopseudomonas.
REFERENCE 1 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Complete sequence of Rhodopseudomonas palustris BisB5
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4892717)
AUTHORS Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,
Chain,P., Malfatti,S., Shin,M., Vergez,L., Schmutz,J., Larimer,F.,
Land,M., Hauser,L., Pelletier,D.A., Kyrpides,N., Lykidis,A.,
Oda,Y., Harwood,C.S. and Richardson,P.
CONSRTM US DOE Joint Genome Institute
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2006) US DOE Joint Genome Institute, 2800
Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA
COMMENT URL -- http://www.jgi.doe.gov
JGI Project ID: 4000372
Source DNA and bacteria available from Caroline S. Harwood
(csh5@u.washington.edu)
Contacts: Caroline S. Harwood (csh5@u.washington.edu)
Paul Richardson (microbes@cuba.jgi-psf.org)
Quality assurance done by JGI-Stanford
Annotation done by JGI-ORNL and JGI-PGF
Finishing done by JGI-LLNL
Finished microbial genomes have been curated to close all gaps with
greater than 98% coverage of at least two independent clones. Each
base pair has a minimum q (quality) value of 30 and the total error
rate is less than one per 50000.
The JGI and collaborators endorse the principles for the
distribution and use of large scale sequencing data adopted by the
larger genome sequencing community and urge users of this data to
follow them. it is our intention to publish the work of this
project in a timely fashion and we welcome collaborative
interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376).
FEATURES Qualifiers
source /organism="Rhodopseudomonas palustris BisB5"
/mol_type="genomic DNA"
/strain="BisB5"
/db_xref="taxon:316057"
protein /locus_tag="RPD_2966"
/transl_table=11
/db_xref="InterPro:IPR005495"
BEGIN
1 MGAIDSYIFR TTLTSFAVVM ASLTGVIWIT QALRGIDLMT SQGQTIVTFL GLTGLAVPVL
61 ILVIAPIALM IAVAHTLNRL ATDSEIIVMN AAGLSPIRLF RPFVYATIAV AVLVTLIGAY
121 IAPDGLRRIA RWDSEITADV LANVLQPGRF AQLEQNLTIR VRERQAGGLL VGVFIDDRRD
181 PNDRVSIIAD HGTVVKNSDG SFLVLEDGHL ERFQAGKQEP ALVAFSRYAF DMSKFSRARD
241 VTYGIREHYL WELIWPDPKD PLLAQVPTQF RAEMHDRLLA PIYPFFFAAV TFAFLGMPRT
301 TRQSRNFSMV GAVACAFVVR LAGFALSVVA NHTPYIAGIQ YLLLAVAIGV SLWLIRRHVV
361 IEPPARLVEA LNALTASLSR LVRRPMTA
//